Basic Information
Locus ID:
gene-BS78_04G149400
Species & Taxonomic ID:
Paspalum vaginatum & 158149
Genome Assembly:
GCA_026573395.1
Short Name:
CTR1
Description:
Ethylene-responsive protein kinase Le-CTR1
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr4 | 29535298 | 29545178 | - | gene-BS78_04G149400 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.17 | 86,943.31 Da | 50.89 | 81.56 | -0.30 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd13999 | STKc_MAP3K-like | 533 | 781 | 3.14906E-130 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 528 | 781 | 4.4E-71 | IPR001245 |
| Pfam | PF14381 | Ethylene-responsive protein kinase Le-CTR1 | 187 | 391 | 2.0E-67 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 502 | 780 | 1.75E-83 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 606 | 792 | 1.9E-63 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 520 | 605 | 8.3E-37 | - |
| SMART | SM00220 | serkin_6 | 527 | 785 | 8.1E-68 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 527 | 785 | 46.505821 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 648 | 660 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 533 | 554 | - | IPR017441 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 642 | 660 | 3.7E-13 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 601 | 614 | 3.7E-13 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 708 | 730 | 3.7E-13 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 752 | 774 | 3.7E-13 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 689 | 699 | 3.7E-13 | IPR001245 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 28 | 47 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 114 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G03730.1 | Protein kinase superfamily protein. Homologous to the RAF family of serine/threonine protein kinases. Negative regulator in the ethylene signal transduction pathway. Interacts with the putative ethylene receptors ETR1 and ERS. Constitutively expressed. | 0 |
| RefSeq | XP_021315554.1 | serine/threonine-protein kinase CTR1 [Sorghum bicolor] | 0 |
| Q05609 | Serine/threonine-protein kinase CTR1 OS=Arabidopsis thaliana OX=3702 GN=CTR1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A194YR70 | Protein kinase domain-containing protein OS=Sorghum bicolor OX=4558 GN=SORBI_3004G163300 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology