halophFGD

Basic Information

Locus ID: gene-BS78_04G141600

Species & Taxonomic ID: Paspalum vaginatum & 158149

Genome Assembly: GCA_026573395.1

Description: Domain of unknown function (DUF3444)

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
chr4	27658064	27661426	+	gene-BS78_04G141600

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
8.97	82,228.52 Da	34.44	68.15	-0.68

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
CDD	cd06257	DnaJ	74	127	1.00106E-20	IPR001623
Pfam	PF00226	DnaJ domain	74	135	2.2E-21	IPR001623
Pfam	PF11926	Domain of unknown function (DUF3444)	486	692	6.4E-73	IPR024593
SUPERFAMILY	SSF46565	Chaperone J-domain	59	134	3.27E-23	IPR036869
Gene3D	G3DSA:1.10.287.110	DnaJ domain	71	178	5.4E-24	IPR036869
SMART	SM00271	dnaj_3	73	130	8.8E-23	IPR001623
ProSiteProfiles	PS50076	dnaJ domain profile.	74	138	18.638113	IPR001623
ProSitePatterns	PS00636	Nt-dnaJ domain signature.	115	134	-	IPR018253
PRINTS	PR00625	DnaJ domain signature	110	130	1.1E-13	IPR001623
PRINTS	PR00625	DnaJ domain signature	76	94	1.1E-13	IPR001623
PRINTS	PR00625	DnaJ domain signature	94	109	1.1E-13	IPR001623
Coils	Coil	Coil	158	178	-	-

KEGG Pathway

KO Term:

K09518 (DnaJ homolog subfamily B member 12)

Pathway:

ko04141 (Protein processing in endoplasmic reticulum) map04141 (Protein processing in endoplasmic reticulum)

Best hit

Source	Best Hit ID	Description
TAIR	AT2G25560.1	DNAJ heat shock N-terminal domain-containing protein.
RefSeq	XP_004952557.1	uncharacterized protein LOC101777479 [Setaria italica]
Swiss-Prot	O89114	DnaJ homolog subfamily B member 5 OS=Mus musculus OX=10090 GN=Dnajb5 PE=2 SV=1
TrEMBL	A0A3L6RTC1	J domain-containing protein OS=Panicum miliaceum OX=4540 GN=C2845_PM11G05050 PE=4 SV=1

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

🔍 Protein-Protein Interaction Network

Orthology

Family	Species	Count	Orthologous Genes
Acanthaceae	Avicennia marina	6	jg13901, jg2207, jg25610, jg33936, jg34504, jg9607
Aizoaceae	Mesembryanthemum crystallinum	3	gene_18008, gene_19826, gene_3280
Amaranthaceae	Atriplex hortensis	3	Ah001823, Ah013942, Ah018689
Amaranthaceae	Beta vulgaris	2	BVRB_3g052370, BVRB_6g150650
Amaranthaceae	Salicornia bigelovii	6	Sbi_jg15124, Sbi_jg31748, Sbi_jg42640, Sbi_jg45256 ... Sbi_jg55958, Sbi_jg57550
Amaranthaceae	Salicornia europaea	3	Seu_jg25235, Seu_jg26436, Seu_jg26911
Amaranthaceae	Suaeda aralocaspica	3	GOSA_00002659, GOSA_00020023, GOSA_00029287
Amaranthaceae	Suaeda glauca	8	Sgl01398, Sgl06473, Sgl06552, Sgl35472, Sgl40889, Sgl54149 ... Sgl54164, Sgl59468
Amaranthaceae	Chenopodium album	9	gene:ENSEOMG00000000521, gene:ENSEOMG00000003444 ... gene:ENSEOMG00000004392, gene:ENSEOMG00000010166, gene:ENSEOMG00000021155, gene:ENSEOMG00000021933, gene:ENSEOMG00000025321, gene:ENSEOMG00000032605, gene:ENSEOMG00000044222
Amaranthaceae	Chenopodium quinoa	6	CQ.Regalona.r1.3AG0004560, CQ.Regalona.r1.3BG0004640 ... CQ.Regalona.r1.5AG0016960, CQ.Regalona.r1.5BG0018450, CQ.Regalona.r1.6AG0002880, CQ.Regalona.r1.6BG0002760
Anacardiaceae	Pistacia vera	2	pistato.v30184980, pistato.v30228750
Apiaceae	Apium graveolens	2	Ag1G01906, Ag3G02589
Arecaceae	Cocos nucifera	3	COCNU_02G009110, COCNU_02G014030, COCNU_15G005190
Arecaceae	Phoenix dactylifera	3	gene-LOC103697819, gene-LOC103713704, gene-LOC103715714
Asparagaceae	Asparagus officinalis	3	AsparagusV1_02.1173.V1.1, AsparagusV1_04.1482.V1.1 ... AsparagusV1_09.1389.V1.1
Asteraceae	Flaveria trinervia	5	Ftri16G19712, Ftri4G12678, Ftri5G18796, Ftri8G17085 ... Ftri8G31709
Brassicaceae	Arabidopsis thaliana	3	AT2G25560.1, AT5G37380.1, AT5G53150.1
Brassicaceae	Eutrema salsugineum	8	Thhalv10000086m.g.v1.0, Thhalv10000169m.g.v1.0 ... Thhalv10010173m.g.v1.0, Thhalv10012364m.g.v1.0, Thhalv10013529m.g.v1.0, Thhalv10027069m.g.v1.0, Thhalv10027481m.g.v1.0, Thhalv10027781m.g.v1.0
Brassicaceae	Schrenkiella parvula	4	Sp4g04940.v2.2, Sp6g15330.v2.2, Sp7g04960.v2.2 ... Sp7g18150.v2.2
Brassicaceae	Brassica nigra	5	BniB01g017850.2N, BniB02g023970.2N, BniB02g023980.2N ... BniB02g031310.2N, BniB07g018580.2N
Casuarinaceae	Casuarina equisetifolia	1	Ceq09G1569
Casuarinaceae	Casuarina glauca	3	Cgl01G2211, Cgl09G1664, Cgl09G1705
Cymodoceaceae	Cymodocea nodosa	3	gene.Cymno04g03030, gene.Cymno07g03690, gene.Cymno08g05780
Hydrocharitaceae	Thalassia testudinum	4	gene.Thate02g07910, gene.Thate05g09860, gene.Thate06g08990 ... gene.Thate08g07710
Malvaceae	Hibiscus hamabo Siebold & Zucc.	2	nbisL1-mrna-11498, nbisL1-mrna-11735
Nitrariaceae	Nitraria sibirica	1	evm.TU.LG03.789
Plantaginaceae	Plantago ovata	4	Pov_00010722, Pov_00035887, Pov_00041123, Pov_00041127
Plumbaginaceae	Limonium bicolor	2	Lb1G04220, Lb1G07835
Poaceae	Echinochloa crus-galli	4	AH09.839, BH09.829, CH07.1746, CH09.896
Poaceae	Eleusine coracana subsp. coracana	7	gene-QOZ80_1AG0039170, gene-QOZ80_1AG0044840 ... gene-QOZ80_1BG0089190, gene-QOZ80_1BG0094850, gene-QOZ80_2AG0131840, gene-QOZ80_2BG0187270, gene-QOZ80_2BG0187280
Poaceae	Hordeum vulgare	4	HORVU.MOREX.r3.2HG0162940.1.CDS1 ... HORVU.MOREX.r3.3HG0311380.1.CDS1, HORVU.MOREX.r3.3HG0330450.1.CDS1, HORVU.MOREX.r3.4HG0411040.1.CDS1
Poaceae	Lolium multiflorum	5	gene-QYE76_031840, gene-QYE76_043686, gene-QYE76_057459 ... gene-QYE76_057499, gene-QYE76_071272
Poaceae	Oryza coarctata	8	Oco02G029850, Oco03G010800, Oco04G011190, Oco05G015470 ... Oco06G015970, Oco07G004090, Oco08G004270, Oco11G009000
Poaceae	Oryza sativa	4	LOC_Os01g69930.1, LOC_Os02g30620.3, LOC_Os03g28310.1 ... LOC_Os04g31940.1
Poaceae	Paspalum vaginatum	4	gene-BS78_03G385800, gene-BS78_04G141600 ... gene-BS78_06G069400, gene-BS78_06G120200
Poaceae	Puccinellia tenuiflora	3	Pt_Chr0303001, Pt_Chr0303017, Pt_Chr0600559
Poaceae	Sporobolus alterniflorus	12	Chr02G002290, Chr02G005250, Chr03G019640, Chr03G023050 ... Chr05G028130, Chr05G032180, Chr06G011270, Chr08G022460, Chr13G011930, Chr13G011940, Chr13G011950, Chr15G012870
Poaceae	Thinopyrum elongatum	4	Tel1E01G034700, Tel2E01G507900, Tel3E01G689800 ... Tel3E01G908000
Poaceae	Triticum dicoccoides	9	gene_TRIDC2AG041130, gene_TRIDC2BG044070 ... gene_TRIDC3AG061540, gene_TRIDC3AG075970, gene_TRIDC3BG069260, gene_TRIDC3BG087190, gene_TRIDC3BG087330, gene_TRIDC4BG053830, gene_TRIDC5AG070180
Poaceae	Triticum aestivum	11	TraesCS2A02G284200.2.cds1, TraesCS2B02G301100.1 ... TraesCS2D02G283100.2.cds1, TraesCS3A02G435100.1, TraesCS3A02G536400.1.cds1, TraesCS3B02G470100.1.cds1, TraesCS3B02G607500.1.cds1, TraesCS3D02G541800.1.cds1, TraesCS4B02G319100.1, TraesCS4D02G315600.1.cds1, TraesCS5A02G493100.1.cds1
Poaceae	Zea mays	7	Zm00001eb022320_P001, Zm00001eb085350_P001 ... Zm00001eb180900_P001, Zm00001eb364230_P001, Zm00001eb421150_P001, Zm00001eb423990_P001, Zm00001eb424000_P001
Poaceae	Zoysia japonica	3	nbis-gene-10959, nbis-gene-11478, nbis-gene-20920
Poaceae	Zoysia macrostachya	4	Zma_g11498, Zma_g13562, Zma_g13563, Zma_g9286
Portulacaceae	Portulaca oleracea	7	evm.TU.LG01.1513, evm.TU.LG02.219, evm.TU.LG02.220 ... evm.TU.LG03.1310, evm.TU.LG09.1459, evm.TU.LG12.357, evm.TU.LG14.777
Posidoniaceae	Posidonia oceanica	2	gene.Posoc01g03710, gene.Posoc05g13120
Rhizophoraceae	Bruguiera sexangula	2	evm.TU.Scaffold_15_RagTag.876, evm.TU.Scaffold_4_RagTag.37
Rhizophoraceae	Carallia pectinifolia	3	nbisL1-mrna-27066, nbisL1-mrna-27251, nbisL1-mrna-29299
Rhizophoraceae	Ceriops tagal	2	nbisL1-mrna-11373, nbisL1-mrna-17820
Rhizophoraceae	Ceriops zippeliana	2	nbisL1-mrna-15531, nbisL1-mrna-2234
Rhizophoraceae	Kandelia candel	2	add.evm.TU.utg000001l.247, add.evm.TU.utg000008l.4
Rhizophoraceae	Kandelia obovata	1	Maker00001288
Rhizophoraceae	Rhizophora apiculata	2	nbisL1-mrna-17625, nbisL1-mrna-21171
Rhizophoraceae	Rhizophora mangle	2	nbisL1-mrna-17653, nbisL1-mrna-6353
Salicaceae	Populus euphratica	9	populus_peu03987, populus_peu03988, populus_peu28088 ... populus_peu28868, populus_peu29525, populus_peu29526, populus_peu30268, populus_peu34826, populus_peu37715
Solanaceae	Lycium barbarum	4	gene-LOC132626351, gene-LOC132632040, gene-LOC132632467 ... gene-LOC132632477
Solanaceae	Solanum chilense	5	SOLCI001735400, SOLCI001822500, SOLCI003525600 ... SOLCI004051400, SOLCI007400100
Solanaceae	Solanum pennellii	4	gene-LOC107008580, gene-LOC107014017, gene-LOC107014129 ... gene-LOC107015060
Tamaricaceae	Reaumuria soongarica	4	STRG.14070_chr05_+, STRG.5090_chr03_+, gene_10365 ... gene_15387
Tamaricaceae	Tamarix chinensis	3	TC01G3302, TC01G3303, TC08G2635
Zosteraceae	Zostera marina	3	Zosma02g24870.v3.1, Zosma04g17000.v3.1, Zosma05g09760.v3.1