Basic Information
Locus ID:
gene-BS78_04G126100
Species & Taxonomic ID:
Paspalum vaginatum & 158149
Genome Assembly:
GCA_026573395.1
Description:
Legume lectin domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr4 | 16341155 | 16343706 | + | gene-BS78_04G126100 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.38 | 72,902.78 Da | 46.06 | 91.17 | 0.04 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd06899 | lectin_legume_LecRK_Arcelin_ConA | 44 | 272 | 2.34617E-69 | IPR001220 |
| Pfam | PF00139 | Legume lectin domain | 44 | 270 | 3.0E-46 | IPR001220 |
| Pfam | PF00069 | Protein kinase domain | 372 | 573 | 8.5E-38 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 353 | 663 | 4.37E-71 | IPR011009 |
| SUPERFAMILY | SSF49899 | Concanavalin A-like lectins/glucanases | 38 | 271 | 2.15E-47 | IPR013320 |
| Gene3D | G3DSA:2.60.120.200 | - | 36 | 277 | 6.7E-52 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 446 | 641 | 1.1E-56 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 339 | 445 | 5.1E-22 | - |
| SMART | SM00220 | serkin_6 | 369 | 634 | 1.3E-28 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 369 | 641 | 33.21986 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 490 | 502 | - | IPR008271 |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G42120.1 | Concanavalin A-like lectin protein kinase family protein. | 0 |
| RefSeq | XP_025791281.1 | L-type lectin-domain containing receptor kinase S.6-like isoform X1 [Panicum hallii] | 0 |
| A0A0P0VIP0 | L-type lectin-domain containing receptor kinase S.7 OS=Oryza sativa subsp. japonica OX=39947 GN=LECRKS7 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3L6QFI0 | L-type lectin-domain containing receptor kinase S.6-like OS=Panicum miliaceum OX=4540 GN=C2845_PM12G13390 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology