Basic Information
Locus ID:
gene-BS78_04G117600
Species & Taxonomic ID:
Paspalum vaginatum & 158149
Genome Assembly:
GCA_026573395.1
Description:
Protein-only RNase P
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr4 | 12471173 | 12476601 | - | gene-BS78_04G117600 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.30 | 80,949.80 Da | 44.94 | 68.01 | -0.63 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd18718 | PIN_PRORP | 553 | 676 | 1.12946E-44 | - |
| Pfam | PF16953 | Protein-only RNase P | 495 | 721 | 3.4E-72 | IPR031595 |
| Pfam | PF17177 | Pentacotripeptide-repeat region of PRORP | 310 | 454 | 1.6E-43 | IPR033443 |
| Pfam | PF17177 | Pentacotripeptide-repeat region of PRORP | 174 | 234 | 1.7E-16 | IPR033443 |
| Gene3D | G3DSA:1.25.40.10 | Tetratricopeptide repeat domain | 307 | 724 | 4.8E-181 | IPR011990 |
| Gene3D | G3DSA:3.40.50.11980 | - | 513 | 687 | 4.8E-181 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 97 | 127 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 151 | 170 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 47 | 183 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 250 | 280 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G32230.1 | proteinaceous RNase P 1. RNase P able to cleave tRNA-like structures involved in the maturation of plant mitochondrial mRNAs. | 0 |
| RefSeq | XP_012698049.1 | proteinaceous RNase P 1, chloroplastic/mitochondrial isoform X1 [Setaria italica] | 0 |
| Q66GI4 | Proteinaceous RNase P 1, chloroplastic/mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PRORP1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2T7F4E3 | ribonuclease P OS=Panicum hallii var. hallii OX=1504633 GN=GQ55_1G106900 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology