Basic Information
Locus ID:
gene-BS78_04G111800
Species & Taxonomic ID:
Paspalum vaginatum & 158149
Genome Assembly:
GCA_026573395.1
Description:
domain-containing protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr4 | 11214640 | 11220942 | + | gene-BS78_04G111800 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.09 | 60,622.10 Da | 53.28 | 74.82 | -0.30 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd18186 | BTB_POZ_ZBTB_KLHL-like | 137 | 211 | 2.22185E-13 | - |
| Pfam | PF07707 | BTB And C-terminal Kelch | 248 | 343 | 4.0E-9 | IPR011705 |
| Pfam | PF00651 | BTB/POZ domain | 137 | 225 | 8.7E-15 | IPR000210 |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 424 | 537 | 1.9E-5 | - |
| SUPERFAMILY | SSF54695 | POZ domain | 137 | 225 | 1.46E-14 | IPR011333 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 97 | 260 | 2.3E-19 | IPR011333 |
| Gene3D | G3DSA:1.25.40.420 | - | 261 | 366 | 2.7E-14 | - |
| SMART | SM00875 | BACK_2 | 242 | 345 | 1.9E-9 | IPR011705 |
| SMART | SM00225 | BTB_4 | 130 | 228 | 3.6E-10 | IPR000210 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 122 | 197 | 14.10817 | IPR000210 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 38 | 81 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 54 | 74 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G61600.1 | POZ/BTB containin G-protein 1. POZ/BTB containing-protein AtPOB1 | 0 |
| RefSeq | XP_025807456.1 | BTB/POZ domain-containing protein POB1-like isoform X2 [Panicum hallii] | 0 |
| Q9FPW6 | BTB/POZ domain-containing protein POB1 OS=Arabidopsis thaliana OX=3702 GN=POB1 PE=1 SV=2 | 0 | |
| TrEMBL | A0A2T8KUY0 | BTB domain-containing protein OS=Panicum hallii OX=206008 GN=PAHAL_1G116800 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology