Basic Information
Locus ID:
gene-BS78_04G105500
Species & Taxonomic ID:
Paspalum vaginatum & 158149
Genome Assembly:
GCA_026573395.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr4 | 10104260 | 10106614 | - | gene-BS78_04G105500 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.22 | 84,565.57 Da | 37.44 | 99.08 | 0.02 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13855 | Leucine rich repeat | 534 | 592 | 2.8E-7 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 93 | 136 | 7.9E-7 | IPR001611 |
| Pfam | PF13516 | Leucine Rich repeat | 509 | 523 | 1.7 | IPR001611 |
| Pfam | PF13516 | Leucine Rich repeat | 298 | 317 | 1.5 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 29 | 75 | 9.4E-6 | IPR013210 |
| SUPERFAMILY | SSF52058 | L domain-like | 61 | 383 | 6.91E-57 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 298 | 622 | 5.61E-49 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 148 | 295 | 1.2E-33 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 296 | 628 | 1.6E-77 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 668 | 761 | 2.3E-6 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 30 | 147 | 5.5E-28 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 344 | 368 | 120.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 248 | 272 | 14.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 174 | 198 | 81.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 100 | 124 | 39.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 508 | 531 | 76.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 532 | 555 | 36.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 556 | 580 | 14.0 | IPR003591 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 534 | 556 | 7.165205 | IPR001611 |
| PRINTS | PR00019 | Leucine-rich repeat signature | 556 | 569 | 8.1E-5 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 127 | 140 | 8.1E-5 | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G25930.1 | Protein kinase family protein with leucine-rich repeat domain. | 0 |
| RefSeq | XP_004954582.1 | receptor-like protein kinase 5 [Setaria italica] | 0 |
| Q5Z9N5 | Leucine-rich repeat receptor-like kinase protein FLORAL ORGAN NUMBER1 OS=Oryza sativa subsp. japonica OX=39947 GN=FON1 PE=1 SV=1 | 0 | |
| TrEMBL | K3YPL1 | Protein kinase domain-containing protein OS=Setaria italica OX=4555 GN=101755460 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology