Basic Information
Locus ID:
gene-BS78_04G099500
Species & Taxonomic ID:
Paspalum vaginatum & 158149
Genome Assembly:
GCA_026573395.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr4 | 9186855 | 9192290 | - | gene-BS78_04G099500 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.08 | 68,094.23 Da | 37.33 | 99.58 | -0.09 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 34 | 73 | 1.8E-8 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 125 | 184 | 2.0E-7 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 298 | 567 | 2.1E-44 | IPR000719 |
| SUPERFAMILY | SSF52058 | L domain-like | 35 | 205 | 1.28E-37 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 279 | 569 | 4.65E-76 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 268 | 372 | 8.8E-36 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 33 | 215 | 6.4E-56 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 373 | 583 | 1.3E-61 | - |
| SMART | SM00220 | serkin_6 | 297 | 575 | 1.8E-33 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 147 | 170 | 230.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 99 | 123 | 8.3 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 171 | 194 | 27.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 297 | 575 | 37.134979 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 303 | 325 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 419 | 431 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G45780.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_025799128.1 | probable LRR receptor-like serine/threonine-protein kinase At5g45780 isoform X1 [Panicum hallii] | 0 |
| C0LGU5 | Probable LRR receptor-like serine/threonine-protein kinase At5g45780 OS=Arabidopsis thaliana OX=3702 GN=At5g45780 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2S3GMZ1 | Protein kinase domain-containing protein OS=Panicum hallii OX=206008 GN=PAHAL_1G101200 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology