Basic Information
Locus ID:
gene-BS78_04G094300
Species & Taxonomic ID:
Paspalum vaginatum & 158149
Genome Assembly:
GCA_026573395.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr4 | 8321991 | 8331276 | - | gene-BS78_04G094300 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.77 | 109,893.51 Da | 41.13 | 96.42 | 0.07 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 691 | 967 | 4.53565E-90 | - |
| Pfam | PF13516 | Leucine Rich repeat | 571 | 588 | 0.11 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 29 | 64 | 1.8E-7 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 83 | 127 | 7.4E-8 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 687 | 920 | 2.3E-41 | IPR000719 |
| SUPERFAMILY | SSF52058 | L domain-like | 395 | 492 | 5.58E-7 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 675 | 965 | 1.3E-70 | IPR011009 |
| SUPERFAMILY | SSF52047 | RNI-like | 96 | 597 | 5.02E-63 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 768 | 981 | 2.5E-56 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 186 | 286 | 1.6E-24 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 27 | 185 | 1.3E-39 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 668 | 767 | 1.5E-20 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 287 | 618 | 1.4E-81 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 574 | 600 | 350.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 501 | 525 | 27.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 116 | 139 | 270.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 549 | 572 | 28.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 337 | 361 | 66.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 239 | 263 | 84.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 91 | 115 | 26.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 685 | 986 | 1.0E-37 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 165 | 189 | 110.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 190 | 215 | 170.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 685 | 971 | 35.580238 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 691 | 718 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 816 | 828 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G25930.1 | Protein kinase family protein with leucine-rich repeat domain. | 0 |
| RefSeq | XP_008645622.2 | receptor-like protein kinase 5 [Zea mays] | 0 |
| P47735 | Receptor-like protein kinase 5 OS=Arabidopsis thaliana OX=3702 GN=RLK5 PE=1 SV=1 | 0 | |
| TrEMBL | A0A811PUA1 | Protein kinase domain-containing protein OS=Miscanthus lutarioriparius OX=422564 GN=NCGR_LOCUS31709 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology