Basic Information
Locus ID:
gene-BS78_04G093000
Species & Taxonomic ID:
Paspalum vaginatum & 158149
Genome Assembly:
GCA_026573395.1
Description:
BTB/POZ domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr4 | 8176310 | 8177398 | - | gene-BS78_04G093000 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.32 | 40,260.56 Da | 49.42 | 83.01 | -0.14 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd18280 | BTB_POZ_BPM_plant | 176 | 287 | 3.63978E-47 | - |
| CDD | cd00121 | MATH | 34 | 156 | 9.01746E-15 | IPR002083 |
| Pfam | PF00651 | BTB/POZ domain | 179 | 288 | 3.5E-26 | IPR000210 |
| SUPERFAMILY | SSF54695 | POZ domain | 163 | 289 | 4.12E-30 | IPR011333 |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 34 | 162 | 6.05E-18 | - |
| Gene3D | G3DSA:2.60.210.10 | Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A | 27 | 160 | 2.6E-15 | IPR008974 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 162 | 283 | 4.4E-35 | IPR011333 |
| Gene3D | G3DSA:1.25.40.420 | - | 289 | 361 | 4.2E-11 | - |
| SMART | SM00225 | BTB_4 | 187 | 290 | 6.4E-25 | IPR000210 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 187 | 255 | 16.962286 | IPR000210 |
| ProSiteProfiles | PS50144 | MATH/TRAF domain profile. | 27 | 156 | 10.930226 | IPR002083 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G06190.1 | BTB-POZ and MATH domain 2. | 0 |
| RefSeq | XP_039814999.1 | BTB/POZ and MATH domain-containing protein 1-like [Panicum virgatum] | 0 |
| Q9M8J9 | BTB/POZ and MATH domain-containing protein 2 OS=Arabidopsis thaliana OX=3702 GN=BPM2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8T0QUX5 | BTB/POZ and MATH domain-containing protein 2 OS=Panicum virgatum OX=38727 GN=PVAP13_6NG150380 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
No orthogroup found for gene-BS78_04G093000.