Basic Information
Locus ID:
gene-BS78_04G079600
Species & Taxonomic ID:
Paspalum vaginatum & 158149
Genome Assembly:
GCA_026573395.1
Description:
Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr4 | 6579474 | 6590036 | + | gene-BS78_04G079600 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 11.76 | 94,937.75 Da | 119.77 | 43.08 | -1.33 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00160 | Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD | 11 | 175 | 2.3E-36 | IPR002130 |
| SUPERFAMILY | SSF50891 | Cyclophilin-like | 4 | 180 | 3.07E-57 | IPR029000 |
| Gene3D | G3DSA:2.40.100.10 | - | 1 | 184 | 2.0E-60 | IPR029000 |
| ProSiteProfiles | PS50072 | Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. | 10 | 176 | 35.281845 | IPR002130 |
| ProSitePatterns | PS00170 | Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. | 59 | 76 | - | IPR020892 |
| PRINTS | PR00153 | Cyclophilin peptidyl-prolyl cis-trans isomerase signature | 122 | 134 | 8.3E-20 | IPR002130 |
| PRINTS | PR00153 | Cyclophilin peptidyl-prolyl cis-trans isomerase signature | 64 | 76 | 8.3E-20 | IPR002130 |
| PRINTS | PR00153 | Cyclophilin peptidyl-prolyl cis-trans isomerase signature | 135 | 150 | 8.3E-20 | IPR002130 |
| PRINTS | PR00153 | Cyclophilin peptidyl-prolyl cis-trans isomerase signature | 107 | 122 | 8.3E-20 | IPR002130 |
| PRINTS | PR00153 | Cyclophilin peptidyl-prolyl cis-trans isomerase signature | 27 | 42 | 8.3E-20 | IPR002130 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 471 | 485 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 804 | 832 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 779 | 794 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 189 | 216 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 405 | 465 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 552 | 583 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 189 | 854 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 271 | 308 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 685 | 707 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 217 | 231 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 367 | 390 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 493 | 513 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 309 | 333 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 708 | 740 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 584 | 605 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G63400.2 | Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein. | 0 |
| RefSeq | XP_008681078.1 | uncharacterized protein LOC100192934 isoform X1 [Zea mays] | 0 |
| Q9LY75 | Peptidyl-prolyl cis-trans isomerase CYP63 OS=Arabidopsis thaliana OX=3702 GN=CYP63 PE=1 SV=1 | 0 | |
| TrEMBL | A0A811PZX6 | PPIase cyclophilin-type domain-containing protein OS=Miscanthus lutarioriparius OX=422564 GN=NCGR_LOCUS35220 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology