Basic Information
Locus ID:
gene-BS78_04G056100
Species & Taxonomic ID:
Paspalum vaginatum & 158149
Genome Assembly:
GCA_026573395.1
Description:
belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr4 | 4433562 | 4442995 | - | gene-BS78_04G056100 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.00 | 86,429.29 Da | 53.72 | 87.11 | -0.28 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 34 | 71 | 2.4E-5 | IPR013210 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 522 | 785 | 3.3E-32 | IPR001245 |
| Pfam | PF13855 | Leucine rich repeat | 120 | 179 | 9.3E-7 | IPR001611 |
| SUPERFAMILY | SSF52058 | L domain-like | 58 | 238 | 6.43E-33 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 486 | 785 | 3.99E-57 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 37 | 259 | 5.5E-40 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 480 | 588 | 8.5E-19 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 590 | 793 | 1.2E-50 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 512 | 788 | 30.364792 | IPR000719 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 375 | 389 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 421 | 446 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 251 | 307 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 348 | 365 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 340 | 405 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G03390.1 | STRUBBELIG-receptor family 3. | 0 |
| RefSeq | XP_039788382.1 | protein STRUBBELIG-RECEPTOR FAMILY 3-like [Panicum virgatum] | 0 |
| Q6R2K3 | Protein STRUBBELIG-RECEPTOR FAMILY 3 OS=Arabidopsis thaliana OX=3702 GN=SRF3 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8T0X043 | Protein kinase domain-containing protein OS=Panicum virgatum OX=38727 GN=PVAP13_1NG070900 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology