Basic Information
Locus ID:
gene-BS78_04G054800
Species & Taxonomic ID:
Paspalum vaginatum & 158149
Genome Assembly:
GCA_026573395.1
Description:
Protein tyrosine kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr4 | 4351949 | 4354648 | + | gene-BS78_04G054800 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.13 | 69,614.06 Da | 40.53 | 93.98 | -0.06 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 373 | 569 | 3.0E-26 | IPR001245 |
| Pfam | PF13855 | Leucine rich repeat | 114 | 173 | 6.2E-9 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 40 | 84 | 1.8E-6 | IPR013210 |
| SUPERFAMILY | SSF52058 | L domain-like | 45 | 245 | 6.05E-28 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 373 | 640 | 4.16E-47 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 206 | 253 | 3.9E-9 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 335 | 444 | 7.0E-18 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 445 | 652 | 1.5E-35 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 39 | 205 | 2.5E-31 | IPR032675 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 369 | 654 | 25.474428 | IPR000719 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 324 | 345 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G50610.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_008680891.1 | pollen receptor-like kinase 5 [Zea mays] | 0 |
| Q9LPT1 | Pollen receptor-like kinase 5 OS=Arabidopsis thaliana OX=3702 GN=PRK5 PE=1 SV=1 | 0 | |
| TrEMBL | A0A811PYV9 | Protein kinase domain-containing protein OS=Miscanthus lutarioriparius OX=422564 GN=NCGR_LOCUS32080 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology