Basic Information
Locus ID:
gene-BS78_04G048000
Species & Taxonomic ID:
Paspalum vaginatum & 158149
Genome Assembly:
GCA_026573395.1
Description:
Belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr4 | 3795805 | 3800313 | + | gene-BS78_04G048000 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.59 | 44,676.41 Da | 42.08 | 92.83 | -0.29 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 52 | 331 | 2.56972E-99 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 48 | 247 | 1.3E-45 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 29 | 348 | 5.26E-79 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 122 | 346 | 2.2E-57 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 7 | 121 | 6.5E-36 | - |
| SMART | SM00220 | serkin_6 | 46 | 277 | 4.1E-32 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 46 | 305 | 36.385876 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 52 | 74 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 168 | 180 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G16670.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_002451600.2 | putative serine/threonine-protein kinase isoform X2 [Sorghum bicolor] | 0 |
| Q93YN1 | Cold-responsive protein kinase 1 OS=Arabidopsis thaliana OX=3702 GN=CRPK1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A194YMX6 | Protein kinase domain-containing protein OS=Sorghum bicolor OX=4558 GN=SORBI_3004G052000 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology