Basic Information
Locus ID:
gene-BS78_04G008900
Species & Taxonomic ID:
Paspalum vaginatum & 158149
Genome Assembly:
GCA_026573395.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr4 | 641161 | 647421 | - | gene-BS78_04G008900 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.96 | 110,575.40 Da | 34.72 | 101.40 | 0.10 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13855 | Leucine rich repeat | 529 | 588 | 5.7E-9 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 409 | 468 | 1.7E-7 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 312 | 372 | 2.6E-7 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 714 | 931 | 3.8E-43 | IPR000719 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 30 | 69 | 6.3E-11 | IPR013210 |
| SUPERFAMILY | SSF52058 | L domain-like | 30 | 302 | 2.38E-59 | - |
| SUPERFAMILY | SSF52047 | RNI-like | 254 | 592 | 1.96E-70 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 712 | 993 | 1.62E-67 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 185 | 280 | 1.4E-30 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 712 | 801 | 3.4E-16 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 376 | 624 | 3.9E-70 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 281 | 375 | 6.4E-20 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 28 | 184 | 2.0E-41 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 802 | 1006 | 2.7E-58 | - |
| SMART | SM00369 | LRR_typ_2 | 335 | 359 | 22.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 551 | 575 | 270.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 263 | 287 | 160.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 95 | 119 | 9.4 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 431 | 455 | 60.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 712 | 993 | 3.6E-25 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 191 | 215 | 17.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 712 | 1000 | 36.074928 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 718 | 742 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 844 | 856 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 993 | 1018 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G28650.1 | Leucine-rich repeat transmembrane protein kinase family protein. | 0 |
| RefSeq | XP_025804564.1 | MDIS1-interacting receptor like kinase 1-like [Panicum hallii] | 0 |
| Q9M0G7 | MDIS1-interacting receptor like kinase 1 OS=Arabidopsis thaliana OX=3702 GN=MIK1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2S3GKF2 | Protein kinase domain-containing protein OS=Panicum hallii OX=206008 GN=PAHAL_1G007400 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology