Basic Information
Locus ID:
gene-BS78_03G373500
Species & Taxonomic ID:
Paspalum vaginatum & 158149
Genome Assembly:
GCA_026573395.1
Description:
BTB/POZ domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3 | 44412357 | 44417808 | + | gene-BS78_03G373500 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.09 | 37,678.98 Da | 53.81 | 81.51 | -0.39 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14733 | BACK | 129 | 172 | 0.00922285 | - |
| Pfam | PF02135 | TAZ zinc finger | 211 | 292 | 3.3E-11 | IPR000197 |
| Pfam | PF00651 | BTB/POZ domain | 20 | 123 | 3.7E-10 | IPR000210 |
| SUPERFAMILY | SSF54695 | POZ domain | 20 | 124 | 4.39E-10 | IPR011333 |
| SUPERFAMILY | SSF57933 | TAZ domain | 203 | 300 | 3.14E-16 | IPR035898 |
| Gene3D | G3DSA:1.25.40.420 | - | 127 | 201 | 1.0E-8 | - |
| Gene3D | G3DSA:1.20.1020.10 | TAZ domain | 202 | 320 | 4.2E-17 | IPR035898 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 12 | 125 | 5.9E-17 | IPR011333 |
| SMART | SM00225 | BTB_4 | 20 | 128 | 4.7E-7 | IPR000210 |
| SMART | SM00551 | TAZ_2 | 204 | 293 | 6.7E-14 | IPR000197 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 18 | 88 | 9.847677 | IPR000210 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G63160.1 | BTB and TAZ domain protein 1. BTB and TAZ domain protein. Short-lived nuclear-cytoplasmic protein targeted for degradation by the 26S proteosome pathway. Acts redundantly with BT2 and BT3 during female gametophyte development. | 0 |
| RefSeq | XP_034594064.1 | BTB/POZ and TAZ domain-containing protein 1 [Setaria viridis] | 0 |
| Q9FMK7 | BTB/POZ and TAZ domain-containing protein 1 OS=Arabidopsis thaliana OX=3702 GN=BT1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A4U6UUN7 | BTB domain-containing protein OS=Setaria viridis OX=4556 GN=SEVIR_5G426800v2 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology