Basic Information
Locus ID:
gene-BS78_03G368700
Species & Taxonomic ID:
Paspalum vaginatum & 158149
Genome Assembly:
GCA_026573395.1
Description:
Leucine rich repeat N-terminal domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3 | 44000178 | 44002070 | + | gene-BS78_03G368700 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.45 | 44,009.99 Da | 51.57 | 103.36 | 0.26 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 33 | 72 | 3.2E-5 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 129 | 175 | 8.0E-8 | IPR001611 |
| SUPERFAMILY | SSF52058 | L domain-like | 102 | 404 | 3.27E-36 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 97 | 386 | 7.4E-51 | IPR032675 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G03440.1 | Leucine-rich repeat (LRR) family protein. | 0 |
| RefSeq | XP_004965417.1 | probable LRR receptor-like serine/threonine-protein kinase At4g20940 [Setaria italica] | 0 |
| TrEMBL | K3XX40 | LRRNT_2 domain-containing protein OS=Setaria italica OX=4555 GN=101783631 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology