Basic Information
Locus ID:
gene-BS78_03G365100
Species & Taxonomic ID:
Paspalum vaginatum & 158149
Genome Assembly:
GCA_026573395.1
Description:
TAZ zinc finger, present in p300 and CBP
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3 | 43782316 | 43791343 | + | gene-BS78_03G365100 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.53 | 48,429.69 Da | 51.68 | 89.09 | -0.26 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14733 | BACK | 202 | 261 | 0.0019761 | - |
| Pfam | PF00651 | BTB/POZ domain | 92 | 196 | 1.1E-11 | IPR000210 |
| Pfam | PF02135 | TAZ zinc finger | 283 | 369 | 1.8E-13 | IPR000197 |
| SUPERFAMILY | SSF57933 | TAZ domain | 277 | 377 | 1.7E-21 | IPR035898 |
| SUPERFAMILY | SSF54695 | POZ domain | 82 | 196 | 1.57E-14 | IPR011333 |
| Gene3D | G3DSA:1.20.1020.10 | TAZ domain | 273 | 396 | 8.1E-21 | IPR035898 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 77 | 199 | 3.7E-18 | IPR011333 |
| Gene3D | G3DSA:1.25.40.420 | - | 200 | 272 | 8.9E-12 | - |
| SMART | SM00551 | TAZ_2 | 276 | 370 | 6.4E-34 | IPR000197 |
| SMART | SM00225 | BTB_4 | 99 | 199 | 2.0E-8 | IPR000210 |
| ProSiteProfiles | PS50134 | Zinc finger TAZ-type profile. | 273 | 372 | 8.898901 | IPR000197 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 99 | 167 | 11.543601 | IPR000210 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G05690.1 | BTB and TAZ domain protein 3. BTB and TAZ domain protein. Acts redunantly with BT1 and BT2 during female gametophyte development. Acts with BT2 during male gametophyte development. | 0 |
| RefSeq | XP_004970874.1 | BTB/POZ and TAZ domain-containing protein 3 [Setaria italica] | 0 |
| Q9SYL0 | BTB/POZ and TAZ domain-containing protein 3 OS=Arabidopsis thaliana OX=3702 GN=BT3 PE=1 SV=2 | 0 | |
| TrEMBL | A0A2T7DDB5 | TAZ-type domain-containing protein OS=Panicum hallii var. hallii OX=1504633 GN=GQ55_5G060500 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology