Basic Information
Locus ID:
gene-BS78_03G363400
Species & Taxonomic ID:
Paspalum vaginatum & 158149
Genome Assembly:
GCA_026573395.1
Description:
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3 | 43655127 | 43662632 | + | gene-BS78_03G363400 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.30 | 84,664.43 Da | 46.14 | 77.47 | -0.44 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF16135 | Tify domain binding domain | 393 | 441 | 1.5E-13 | IPR032308 |
| Pfam | PF16135 | Tify domain binding domain | 154 | 208 | 2.3E-7 | IPR032308 |
| SUPERFAMILY | SSF55729 | Acyl-CoA N-acyltransferases (Nat) | 605 | 729 | 1.31E-10 | IPR016181 |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 493 | 563 | 2.5E-5 | IPR013083 |
| Gene3D | G3DSA:3.40.630.30 | - | 601 | 738 | 3.7E-7 | - |
| ProSiteProfiles | PS50016 | Zinc finger PHD-type profile. | 497 | 564 | 8.6178 | IPR019787 |
| ProSiteProfiles | PS51186 | Gcn5-related N-acetyltransferase (GNAT) domain profile. | 595 | 748 | 11.258425 | IPR000182 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 21 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 333 | 358 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 35 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G53680.2 | - | 0 |
| RefSeq | XP_034574428.1 | uncharacterized protein LOC117838490 isoform X2 [Setaria viridis] | 0 |
| TrEMBL | A0A2S3IRY2 | N-acetyltransferase domain-containing protein OS=Panicum hallii OX=206008 GN=PAHAL_9G511700 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology