Basic Information
Locus ID:
gene-BS78_03G317100
Species & Taxonomic ID:
Paspalum vaginatum & 158149
Genome Assembly:
GCA_026573395.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3 | 40225479 | 40235401 | - | gene-BS78_03G317100 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.14 | 103,120.52 Da | 42.02 | 96.78 | -0.07 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 622 | 888 | 3.15509E-92 | - |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 32 | 69 | 1.7E-5 | IPR013210 |
| Pfam | PF00069 | Protein kinase domain | 617 | 883 | 1.7E-46 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 598 | 886 | 4.1E-78 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 41 | 385 | 6.97E-52 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 692 | 905 | 2.5E-57 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 589 | 691 | 9.5E-35 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 294 | 366 | 1.9E-9 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 190 | 293 | 6.3E-23 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 32 | 189 | 9.4E-40 | IPR032675 |
| SMART | SM00220 | serkin_6 | 616 | 888 | 7.5E-40 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 616 | 888 | 38.039555 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 736 | 748 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 622 | 644 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G06840.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_012701538.1 | probable LRR receptor-like serine/threonine-protein kinase At1g06840 isoform X1 [Setaria italica] | 0 |
| C0LGD7 | Probable LRR receptor-like serine/threonine-protein kinase At1g06840 OS=Arabidopsis thaliana OX=3702 GN=At1g06840 PE=1 SV=2 | 0 | |
| TrEMBL | K3XE91 | Protein kinase domain-containing protein OS=Setaria italica OX=4555 GN=101766119 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology