Basic Information
Locus ID:
gene-BS78_03G315800
Species & Taxonomic ID:
Paspalum vaginatum & 158149
Genome Assembly:
GCA_026573395.1
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3 | 39968165 | 39974811 | + | gene-BS78_03G315800 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.39 | 103,011.98 Da | 31.64 | 94.52 | -0.03 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 649 | 913 | 1.12709E-92 | - |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 26 | 62 | 3.5E-6 | IPR013210 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 646 | 911 | 3.1E-48 | IPR001245 |
| SUPERFAMILY | SSF52058 | L domain-like | 50 | 395 | 1.97E-44 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 629 | 918 | 1.35E-78 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 226 | 293 | 3.3E-15 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 719 | 928 | 1.7E-57 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 615 | 718 | 2.1E-35 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 294 | 422 | 1.0E-14 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 25 | 225 | 4.2E-44 | IPR032675 |
| SMART | SM00220 | serkin_6 | 643 | 916 | 1.9E-34 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 643 | 916 | 39.735634 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 762 | 774 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 649 | 671 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 921 | 943 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G79620.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_020406022.1 | probable leucine-rich repeat receptor-like protein kinase At5g49770 [Zea mays] | 0 |
| Q8GZ99 | Leucine-rich repeat receptor protein kinase HPCA1 OS=Arabidopsis thaliana OX=3702 GN=HPCA1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A368RCC4 | Protein kinase domain-containing protein (Fragment) OS=Setaria italica OX=4555 GN=SETIT_5G359300v2 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology