Basic Information
Locus ID:
gene-BS78_03G272000
Species & Taxonomic ID:
Paspalum vaginatum & 158149
Genome Assembly:
GCA_026573395.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3 | 36720178 | 36723528 | + | gene-BS78_03G272000 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.69 | 111,423.75 Da | 37.52 | 97.67 | -0.01 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13855 | Leucine rich repeat | 300 | 359 | 3.3E-8 | IPR001611 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 711 | 993 | 1.5E-41 | IPR001245 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 35 | 77 | 1.9E-5 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 85 | 140 | 1.0E-7 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 495 | 547 | 1.8E-6 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 154 | 213 | 1.6E-6 | IPR001611 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 705 | 995 | 4.51E-70 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 38 | 289 | 1.33E-49 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 297 | 599 | 5.95E-59 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 380 | 636 | 1.5E-62 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 295 | 372 | 1.2E-20 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 188 | 294 | 7.7E-24 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 34 | 187 | 2.3E-41 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 695 | 792 | 2.8E-16 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 793 | 1016 | 5.5E-60 | - |
| SMART | SM00369 | LRR_typ_2 | 346 | 370 | 33.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 177 | 201 | 9.7 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 103 | 127 | 15.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 250 | 274 | 9.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 709 | 995 | 1.9E-30 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 558 | 582 | 63.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 300 | 321 | 330.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 510 | 534 | 21.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 322 | 345 | 330.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 709 | 995 | 36.428276 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 715 | 742 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 846 | 858 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1025 | 1043 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1002 | 1043 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G25930.1 | Protein kinase family protein with leucine-rich repeat domain. | 0 |
| RefSeq | XP_025814243.1 | receptor-like protein kinase HSL1 [Panicum hallii] | 0 |
| O49545 | Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1 OS=Arabidopsis thaliana OX=3702 GN=BAM1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2T8IKA2 | Protein kinase domain-containing protein OS=Panicum hallii OX=206008 GN=PAHAL_5G164200 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology