Basic Information
Locus ID:
gene-BS78_03G271900
Species & Taxonomic ID:
Paspalum vaginatum & 158149
Genome Assembly:
GCA_026573395.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3 | 36714239 | 36717442 | + | gene-BS78_03G271900 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.96 | 105,444.85 Da | 42.82 | 93.67 | -0.04 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13855 | Leucine rich repeat | 341 | 392 | 6.5E-7 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 34 | 73 | 3.8E-7 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 79 | 136 | 2.8E-9 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 433 | 484 | 7.3E-8 | IPR001611 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 645 | 932 | 9.7E-44 | IPR001245 |
| Pfam | PF13516 | Leucine Rich repeat | 518 | 533 | 0.037 | IPR001611 |
| SUPERFAMILY | SSF52047 | RNI-like | 80 | 548 | 4.87E-70 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 640 | 934 | 2.46E-69 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 727 | 955 | 2.7E-59 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 35 | 148 | 2.5E-28 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 637 | 726 | 2.5E-16 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 245 | 562 | 5.7E-86 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 149 | 244 | 1.3E-19 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 495 | 519 | 57.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 447 | 471 | 31.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 283 | 307 | 7.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 173 | 197 | 190.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 124 | 147 | 82.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 352 | 378 | 250.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 379 | 407 | 250.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 99 | 123 | 9.2 | IPR003591 |
| SMART | SM00220 | serkin_6 | 643 | 941 | 2.1E-29 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 643 | 935 | 36.202133 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 649 | 676 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 786 | 798 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 944 | 988 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 968 | 988 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G25930.1 | Protein kinase family protein with leucine-rich repeat domain. | 0 |
| RefSeq | XP_025814243.1 | receptor-like protein kinase HSL1 [Panicum hallii] | 0 |
| Q9SYQ8 | Receptor protein kinase CLAVATA1 OS=Arabidopsis thaliana OX=3702 GN=CLV1 PE=1 SV=3 | 0 | |
| TrEMBL | A0A2T8IKA2 | Protein kinase domain-containing protein OS=Panicum hallii OX=206008 GN=PAHAL_5G164200 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology