halophFGD

Basic Information

Locus ID: gene-BS78_03G261400

Species & Taxonomic ID: Paspalum vaginatum & 158149

Genome Assembly: GCA_026573395.1

Description:

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
chr3	35957778	35959132	-	gene-BS78_03G261400

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
9.37	43,472.39 Da	43.11	74.58	-0.23

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
Pfam	PF12937	F-box-like	31	65	2.1E-6	IPR001810
SUPERFAMILY	SSF81383	F-box domain	25	64	1.7E-6	IPR036047
Gene3D	G3DSA:1.20.1280.50	-	24	70	3.0E-5	-

Gene Ontology

Molecular Function:

GO:0005515 (protein binding)

Best hit

Source	Best Hit ID	Description	E-value
RefSeq	XP_051221313.1	uncharacterized protein LOC127339507 [Lolium perenne]	0
TrEMBL	A0A2T8KXN2	F-box domain-containing protein OS=Panicum hallii OX=206008 GN=PAHAL_1G379200 PE=4 SV=1	0

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

🔍 Protein-Protein Interaction Network

Orthology

Family	Species	Count	Orthologous Genes
Poaceae	Echinochloa crus-galli	31	AH01.2484, AH01.2722, AH02.158, AH02.159, AH05.199, AH08.382 ... AH07.1620, AH08.1501, AH08.383, BH01.2829, BH01.2909, BH01.3055, BH04.289, BH04.292, BH04.295, BH07.4000, BH08.1480, BH08.388, BH08.389, BH08.391, BH08.392, CH01.3031, CH01.3110, CH01.3277, CH02.174, CH02.176, CH04.314, CH08.465, CH08.466, CH08.467, CH08.626
Poaceae	Eleusine coracana subsp. coracana	19	gene-QOZ80_1AG0023930, gene-QOZ80_1BG0050170 ... gene-QOZ80_1BG0050470, gene-QOZ80_1BG0088840, gene-QOZ80_2AG0111140, gene-QOZ80_2AG0111270, gene-QOZ80_2AG0118900, gene-QOZ80_2BG0164560, gene-QOZ80_2BG0172670, gene-QOZ80_3BG0266740, gene-QOZ80_5AG0403950, gene-QOZ80_5BG0428940, gene-QOZ80_5BG0452860, gene-QOZ80_6AG0524120, gene-QOZ80_8AG0618250, gene-QOZ80_8BG0645670, gene-QOZ80_8BG0645710, gene-QOZ80_9AG0679000, gene-QOZ80_9BG0702710
Poaceae	Hordeum vulgare	3	HORVU.MOREX.r3.5HG0430290.1.CDS1 ... HORVU.MOREX.r3.5HG0529170.1.CDS1, HORVU.MOREX.r3.7HG0651420.1.CDS1
Poaceae	Lolium multiflorum	1	gene-QYE76_001051
Poaceae	Oryza coarctata	6	Oco15G005160, Oco19G001460, Oco19G002160, Oco20G001180 ... Oco20G002300, Oco23G004210
Poaceae	Oryza sativa	9	LOC_Os01g54770.1, LOC_Os05g02700.1, LOC_Os05g36980.1 ... LOC_Os10g01430.1, LOC_Os10g10420.1, LOC_Os10g12200.1, LOC_Os10g17930.1, LOC_Os10g17940.1, LOC_Os11g05460.1
Poaceae	Paspalum vaginatum	10	gene-BS78_03G013300, gene-BS78_03G261400 ... gene-BS78_05G050800, gene-BS78_06G133800, gene-BS78_07G051600, gene-BS78_07G051800, gene-BS78_07G051900, gene-BS78_08G089000, gene-BS78_08G089200, gene-BS78_09G031100
Poaceae	Puccinellia tenuiflora	14	Pt_Chr0104514, Pt_Chr0108045, Pt_Chr0108046, Pt_Chr0108047 ... Pt_Chr0108049, Pt_Chr0108050, Pt_Chr0108062, Pt_Chr0505745, Pt_Chr0600855, Pt_Chr0600858, Pt_Chr0601579, Pt_Chr0605889, Pt_Chr0605891, Pt_Chr0704516
Poaceae	Sporobolus alterniflorus	8	Chr01G011950, Chr01G012230, Chr12G024420, Chr12G024710 ... Chr19G013430, Chr20G008020, Chr20G011350, Chr29G011260
Poaceae	Thinopyrum elongatum	2	Tel6E01G248200, Tel6E01G248800
Poaceae	Triticum dicoccoides	1	gene_TRIDC5BG076130
Poaceae	Triticum aestivum	14	TraesCS2A02G361300.1.cds1, TraesCS2A02G361800.1.cds1 ... TraesCS3B02G435400.1.cds1, TraesCS3B02G570000.1.cds1, TraesCS3D02G511700.1.cds1, TraesCS4A02G363600.1.cds1, TraesCS5B02G509800.1.cds1, TraesCS5D02G509900.1.cds1, TraesCS6B02G141800.1.cds1, TraesCS6B02G141900.1.cds1, TraesCS6D02G102800.1.cds1, TraesCS6D02G102900.1.cds1, TraesCS6D02G103000.1.cds1, TraesCSU02G146700.1.cds1
Poaceae	Zea mays	1	Zm00001eb250820_P001
Poaceae	Zoysia japonica	14	nbis-gene-12116, nbis-gene-24318, nbis-gene-34021 ... nbis-gene-34022, nbis-gene-41629, nbis-gene-41630, nbis-gene-41632, nbis-gene-41633, nbis-gene-41638, nbis-gene-43891, nbis-gene-43892, nbis-gene-58465, nbis-gene-58817, nbis-gene-59004
Poaceae	Zoysia macrostachya	11	Zma_g15266, Zma_g15268, Zma_g15269, Zma_g15270, Zma_g15271 ... Zma_g15272, Zma_g15273, Zma_g15274, Zma_g23644, Zma_g23645, Zma_g23646