Basic Information
Locus ID:
gene-BS78_03G228600
Species & Taxonomic ID:
Paspalum vaginatum & 158149
Genome Assembly:
GCA_026573395.1
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3 | 33208707 | 33213565 | + | gene-BS78_03G228600 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.35 | 71,742.80 Da | 49.68 | 88.54 | -0.24 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13855 | Leucine rich repeat | 93 | 152 | 2.1E-7 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 29 | 66 | 1.5E-9 | IPR013210 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 370 | 621 | 1.3E-23 | IPR001245 |
| SUPERFAMILY | SSF52058 | L domain-like | 29 | 158 | 3.29E-26 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 370 | 621 | 3.27E-39 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 331 | 439 | 4.4E-14 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 441 | 628 | 8.8E-30 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 25 | 209 | 6.5E-37 | IPR032675 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 357 | 625 | 18.37916 | IPR000719 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 187 | 222 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G45840.2 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_039848448.1 | protein MALE DISCOVERER 2-like [Panicum virgatum] | 0 |
| C0LGQ4 | Protein MALE DISCOVERER 2 OS=Arabidopsis thaliana OX=3702 GN=MDIS2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3L6R4D6 | Putative LRR receptor-like serine/threonine-protein kinase OS=Panicum miliaceum OX=4540 GN=C2845_PM08G21800 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology