Basic Information
Locus ID:
gene-BS78_03G200000
Species & Taxonomic ID:
Paspalum vaginatum & 158149
Genome Assembly:
GCA_026573395.1
Description:
ATPase family associated with various cellular activities (AAA)
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3 | 30714362 | 30719999 | + | gene-BS78_03G200000 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.50 | 89,338.72 Da | 39.15 | 87.59 | -0.37 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00009 | AAA | 505 | 638 | 1.15642E-21 | - |
| Pfam | PF17862 | AAA+ lid domain | 661 | 703 | 5.7E-13 | IPR041569 |
| Pfam | PF00004 | ATPase family associated with various cellular activities (AAA) | 507 | 637 | 4.1E-39 | IPR003959 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 467 | 696 | 7.41E-59 | IPR027417 |
| Gene3D | G3DSA:1.10.8.60 | - | 639 | 720 | 1.1E-94 | - |
| Gene3D | G3DSA:3.40.50.300 | - | 465 | 638 | 1.1E-94 | IPR027417 |
| SMART | SM00382 | AAA_5 | 503 | 640 | 7.2E-20 | IPR003593 |
| ProSitePatterns | PS00674 | AAA-protein family signature. | 610 | 629 | - | IPR003960 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 697 | 768 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 697 | 776 | - | - |
| Coils | Coil | Coil | 690 | 718 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G64110.1 | P-loop containing nucleoside triphosphate hydrolases superfamily protein. | 0 |
| RefSeq | XP_034594671.1 | ribosome biogenesis ATPase RIX7-like [Setaria viridis] | 0 |
| Q7ZZ25 | Outer mitochondrial transmembrane helix translocase OS=Danio rerio OX=7955 GN=atad1a PE=2 SV=2 | 0 | |
| TrEMBL | A0A4U6UK68 | AAA domain-containing protein OS=Setaria viridis OX=4556 GN=SEVIR_5G239100v2 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology