Basic Information
Locus ID:
gene-BS78_03G172100
Species & Taxonomic ID:
Paspalum vaginatum & 158149
Genome Assembly:
GCA_026573395.1
Description:
Leucine rich repeat
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3 | 27667533 | 27671955 | - | gene-BS78_03G172100 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.71 | 72,170.00 Da | 37.94 | 100.81 | 0.15 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13855 | Leucine rich repeat | 147 | 207 | 3.3E-9 | IPR001611 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 441 | 690 | 1.3E-35 | IPR001245 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 30 | 72 | 1.4E-6 | IPR013210 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 401 | 690 | 1.71E-50 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 66 | 239 | 2.87E-40 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 29 | 144 | 3.4E-23 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 504 | 693 | 4.6E-39 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 148 | 261 | 4.0E-31 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 393 | 502 | 9.6E-21 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 421 | 693 | 26.831291 | IPR000719 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G45340.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_002458036.1 | probable LRR receptor-like serine/threonine-protein kinase At1g12460 [Sorghum bicolor] | 0 |
| Q9FFW5 | Proline-rich receptor-like protein kinase PERK8 OS=Arabidopsis thaliana OX=3702 GN=PERK8 PE=1 SV=1 | 0 | |
| TrEMBL | C5XNT1 | Protein kinase domain-containing protein OS=Sorghum bicolor OX=4558 GN=SORBI_3003G196000 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology