Basic Information
Locus ID:
gene-BS78_03G161100
Species & Taxonomic ID:
Paspalum vaginatum & 158149
Genome Assembly:
GCA_026573395.1
Description:
Salt stress response/antifungal
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3 | 24604428 | 24607957 | - | gene-BS78_03G161100 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.68 | 71,917.81 Da | 40.51 | 84.46 | -0.08 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 334 | 599 | 1.48713E-89 | - |
| Pfam | PF00069 | Protein kinase domain | 329 | 596 | 5.8E-46 | IPR000719 |
| Pfam | PF01657 | Salt stress response/antifungal | 49 | 132 | 5.0E-11 | IPR002902 |
| Pfam | PF01657 | Salt stress response/antifungal | 147 | 242 | 3.2E-13 | IPR002902 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 304 | 599 | 1.64E-76 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 289 | 403 | 1.6E-30 | - |
| Gene3D | G3DSA:3.30.430.20 | - | 140 | 245 | 3.7E-17 | IPR038408 |
| Gene3D | G3DSA:3.30.430.20 | - | 32 | 134 | 7.4E-15 | IPR038408 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 406 | 614 | 4.2E-59 | - |
| SMART | SM00220 | serkin_6 | 328 | 599 | 4.7E-31 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 328 | 620 | 36.951237 | IPR000719 |
| ProSiteProfiles | PS51257 | Prokaryotic membrane lipoprotein lipid attachment site profile. | 1 | 17 | 6.0 | - |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 33 | 134 | 15.873307 | IPR002902 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 140 | 245 | 16.588423 | IPR002902 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 334 | 356 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 449 | 461 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G70520.1 | cysteine-rich RLK (RECEPTOR-like protein kinase) 2. Encodes a cysteine-rich receptor-like protein kinase. | 0 |
| RefSeq | XP_021313384.1 | cysteine-rich receptor-like protein kinase 2 [Sorghum bicolor] | 0 |
| Q9CAL3 | Cysteine-rich receptor-like protein kinase 2 OS=Arabidopsis thaliana OX=3702 GN=CRK2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A1B6Q480 | Cysteine-rich receptor-like protein kinase 2 OS=Sorghum bicolor OX=4558 GN=SORBI_3003G188100 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology