Basic Information
Locus ID:
gene-BS78_03G157400
Species & Taxonomic ID:
Paspalum vaginatum & 158149
Genome Assembly:
GCA_026573395.1
Description:
G-type lectin S-receptor-like serine threonine-protein kinase SD2-5
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3 | 23967313 | 23969554 | + | gene-BS78_03G157400 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.36 | 64,215.43 Da | 45.12 | 93.01 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd09217 | TLP-P | 60 | 214 | 2.88514E-78 | - |
| Pfam | PF00069 | Protein kinase domain | 337 | 546 | 7.4E-46 | IPR000719 |
| Pfam | PF00314 | Thaumatin family | 64 | 176 | 2.1E-29 | IPR001938 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 315 | 551 | 2.0E-69 | IPR011009 |
| SUPERFAMILY | SSF49870 | Osmotin, thaumatin-like protein | 59 | 214 | 2.49E-49 | IPR037176 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 406 | 585 | 2.2E-50 | - |
| Gene3D | G3DSA:2.60.110.10 | Thaumatin | 59 | 179 | 8.5E-39 | IPR037176 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 294 | 405 | 9.9E-29 | - |
| Gene3D | G3DSA:2.60.110.10 | Thaumatin | 180 | 216 | 1.6E-5 | IPR037176 |
| SMART | SM00220 | serkin_6 | 332 | 575 | 1.3E-31 | IPR000719 |
| SMART | SM00205 | tha2 | 60 | 214 | 1.5E-44 | IPR001938 |
| ProSiteProfiles | PS51367 | Thaumatin family profile. | 57 | 214 | 32.157658 | IPR001938 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 332 | 584 | 36.569618 | IPR000719 |
| ProSitePatterns | PS00316 | Thaumatin family signature. | 114 | 129 | - | IPR017949 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 338 | 359 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 453 | 465 | - | IPR008271 |
| PRINTS | PR00347 | Pathogenesis-related protein signature | 59 | 71 | 4.4E-39 | IPR001938 |
| PRINTS | PR00347 | Pathogenesis-related protein signature | 79 | 88 | 4.4E-39 | IPR001938 |
| PRINTS | PR00347 | Pathogenesis-related protein signature | 102 | 113 | 4.4E-39 | IPR001938 |
| PRINTS | PR00347 | Pathogenesis-related protein signature | 149 | 165 | 4.4E-39 | IPR001938 |
| PRINTS | PR00347 | Pathogenesis-related protein signature | 114 | 143 | 4.4E-39 | IPR001938 |
| PRINTS | PR00347 | Pathogenesis-related protein signature | 204 | 213 | 4.4E-39 | IPR001938 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G32300.1 | S-domain-2 5. | 0 |
| RefSeq | XP_021312486.1 | G-type lectin S-receptor-like serine/threonine-protein kinase SD2-5 [Sorghum bicolor] | 0 |
| Q8RWZ5 | G-type lectin S-receptor-like serine/threonine-protein kinase SD2-5 OS=Arabidopsis thaliana OX=3702 GN=SD25 PE=1 SV=1 | 0 | |
| TrEMBL | C5XNQ8 | Protein kinase domain-containing protein OS=Sorghum bicolor OX=4558 GN=SORBI_3003G193200 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology