Basic Information
Locus ID:
gene-BS78_03G111000
Species & Taxonomic ID:
Paspalum vaginatum & 158149
Genome Assembly:
GCA_026573395.1
Description:
ENT domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3 | 9600159 | 9601365 | + | gene-BS78_03G111000 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.24 | 39,441.78 Da | 60.35 | 49.42 | -0.94 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF12776 | Myb/SANT-like DNA-binding domain | 57 | 149 | 5.7E-11 | IPR024752 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 216 | 234 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 39 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 197 | 240 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | NP_001360917.1 | uncharacterized protein LOC100278120 [Zea mays] | 0 |
| TrEMBL | B6U452 | Myb_DNA-bind_3 domain-containing protein OS=Zea mays OX=4577 PE=2 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Brassicaceae | Brassica nigra | 1 | BniB03g058380.2N |
| Poaceae | Echinochloa crus-galli | 24 | AH01.4755, AH02.2722, AH04.1015, AH05.1286, AH05.1766 ... |
| Poaceae | Eleusine coracana subsp. coracana | 1 | gene-QOZ80_1BG0063290 |
| Poaceae | Hordeum vulgare | 1 | HORVU.MOREX.r3.2HG0136190.1 |
| Poaceae | Oryza sativa | 1 | LOC_Os05g46770.1 |
| Poaceae | Paspalum vaginatum | 13 | gene-BS78_01G057300, gene-BS78_02G211300, gene-BS78_K021000 ... |
| Poaceae | Sporobolus alterniflorus | 18 | Chr01G028140, Chr02G020120, Chr02G020680, Chr03G014060 ... |
| Poaceae | Thinopyrum elongatum | 1 | Tel3E01G440600 |
| Poaceae | Triticum dicoccoides | 3 | gene_TRIDC2AG030720, gene_TRIDC2AG037920 ... |
| Poaceae | Zea mays | 4 | Zm00001eb009750_P001, Zm00001eb012990_P001 ... |
| Poaceae | Zoysia japonica | 1 | nbis-gene-21483 |
| Poaceae | Zoysia macrostachya | 1 | Zma_g10439 |