Basic Information
Locus ID:
gene-BS78_03G096200
Species & Taxonomic ID:
Paspalum vaginatum & 158149
Genome Assembly:
GCA_026573395.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3 | 8310998 | 8315227 | + | gene-BS78_03G096200 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.56 | 103,980.95 Da | 36.21 | 101.79 | 0.14 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 694 | 962 | 8.59854E-90 | - |
| Pfam | PF00069 | Protein kinase domain | 690 | 954 | 2.8E-40 | IPR000719 |
| Pfam | PF00560 | Leucine Rich Repeat | 173 | 194 | 0.63 | IPR001611 |
| Pfam | PF13516 | Leucine Rich repeat | 116 | 131 | 0.99 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 487 | 545 | 4.3E-9 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 24 | 64 | 2.8E-11 | IPR013210 |
| Pfam | PF00560 | Leucine Rich Repeat | 94 | 113 | 1.6 | IPR001611 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 665 | 959 | 6.61E-74 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 390 | 577 | 4.83E-29 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 54 | 350 | 2.18E-43 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 359 | 579 | 1.9E-42 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 649 | 763 | 1.1E-28 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 23 | 143 | 1.0E-25 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 144 | 235 | 2.2E-17 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 239 | 358 | 1.9E-16 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 764 | 965 | 3.9E-58 | - |
| SMART | SM00369 | LRR_typ_2 | 484 | 507 | 160.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 688 | 962 | 2.9E-37 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 508 | 532 | 110.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 556 | 579 | 24.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 195 | 219 | 37.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 688 | 962 | 37.841679 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 808 | 820 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 694 | 716 | - | IPR017441 |
| PRINTS | PR00019 | Leucine-rich repeat signature | 508 | 521 | 8.2E-5 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 305 | 318 | 8.2E-5 | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G02130.2 | - | 0 |
| RefSeq | XP_004967917.1 | LRR receptor-like serine/threonine-protein kinase RPK2 [Setaria italica] | 0 |
| Q9S7I6 | LRR receptor-like serine/threonine-protein kinase RPK2 OS=Arabidopsis thaliana OX=3702 GN=RPK2 PE=1 SV=1 | 0 | |
| TrEMBL | K3XE73 | Protein kinase domain-containing protein OS=Setaria italica OX=4555 GN=101766247 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology