Basic Information
Locus ID:
gene-BS78_03G093300
Species & Taxonomic ID:
Paspalum vaginatum & 158149
Genome Assembly:
GCA_026573395.1
Description:
G-type lectin S-receptor-like serine threonine-protein kinase SD2-5
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3 | 7973509 | 7975704 | + | gene-BS78_03G093300 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.71 | 69,743.81 Da | 43.75 | 79.20 | -0.20 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 328 | 594 | 6.7212E-87 | - |
| CDD | cd09218 | TLP-PA | 25 | 234 | 4.23295E-87 | - |
| Pfam | PF00314 | Thaumatin family | 30 | 235 | 1.1E-62 | IPR001938 |
| Pfam | PF00069 | Protein kinase domain | 326 | 590 | 7.9E-51 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 306 | 593 | 3.96E-76 | IPR011009 |
| SUPERFAMILY | SSF49870 | Osmotin, thaumatin-like protein | 24 | 236 | 7.72E-80 | IPR037176 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 396 | 608 | 5.4E-60 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 287 | 395 | 4.9E-29 | - |
| Gene3D | G3DSA:2.60.110.10 | Thaumatin | 24 | 235 | 4.2E-78 | IPR037176 |
| SMART | SM00220 | serkin_6 | 322 | 592 | 2.5E-40 | IPR000719 |
| SMART | SM00205 | tha2 | 26 | 235 | 9.7E-113 | IPR001938 |
| ProSiteProfiles | PS51367 | Thaumatin family profile. | 23 | 235 | 44.817085 | IPR001938 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 322 | 607 | 40.187923 | IPR000719 |
| ProSitePatterns | PS00316 | Thaumatin family signature. | 80 | 95 | - | IPR017949 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 328 | 349 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 443 | 455 | - | IPR008271 |
| PRINTS | PR00347 | Pathogenesis-related protein signature | 117 | 133 | 2.5E-40 | IPR001938 |
| PRINTS | PR00347 | Pathogenesis-related protein signature | 25 | 37 | 2.5E-40 | IPR001938 |
| PRINTS | PR00347 | Pathogenesis-related protein signature | 45 | 54 | 2.5E-40 | IPR001938 |
| PRINTS | PR00347 | Pathogenesis-related protein signature | 80 | 109 | 2.5E-40 | IPR001938 |
| PRINTS | PR00347 | Pathogenesis-related protein signature | 67 | 78 | 2.5E-40 | IPR001938 |
| PRINTS | PR00347 | Pathogenesis-related protein signature | 225 | 234 | 2.5E-40 | IPR001938 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G38280.1 | PR5-like receptor kinase. putative receptor serine/threonine kinase PR5K (PR5K) mRNA, PR5-like receptor kinase | 0 |
| RefSeq | XP_025802906.1 | PR5-like receptor kinase [Panicum hallii] | 0 |
| Q9FF29 | PR5-like receptor kinase OS=Arabidopsis thaliana OX=3702 GN=PR5K PE=1 SV=1 | 0 | |
| TrEMBL | A0A8T0RM52 | Protein kinase domain-containing protein OS=Panicum virgatum OX=38727 GN=PVAP13_5NG142700 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology