Basic Information
Locus ID:
gene-BS78_03G048800
Species & Taxonomic ID:
Paspalum vaginatum & 158149
Genome Assembly:
GCA_026573395.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3 | 4232985 | 4239196 | + | gene-BS78_03G048800 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.15 | 69,694.08 Da | 34.44 | 97.61 | -0.11 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 37 | 76 | 3.1E-11 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 129 | 187 | 1.0E-7 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 310 | 579 | 7.4E-43 | IPR000719 |
| SUPERFAMILY | SSF52058 | L domain-like | 37 | 196 | 2.04E-35 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 286 | 583 | 3.14E-74 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 278 | 385 | 1.7E-35 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 36 | 218 | 1.3E-52 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 386 | 601 | 1.9E-62 | - |
| SMART | SM00220 | serkin_6 | 309 | 582 | 6.2E-32 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 309 | 592 | 35.650906 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 432 | 444 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 315 | 337 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G60800.1 | NSP-interacting kinase 3. | 0 |
| RefSeq | XP_039846321.1 | protein NSP-INTERACTING KINASE 3-like [Panicum virgatum] | 0 |
| Q93ZS4 | Protein NSP-INTERACTING KINASE 3 OS=Arabidopsis thaliana OX=3702 GN=NIK3 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8T0SE94 | Protein kinase domain-containing protein OS=Panicum virgatum OX=38727 GN=PVAP13_5KG071100 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology