Basic Information
Locus ID:
gene-BS78_03G034800
Species & Taxonomic ID:
Paspalum vaginatum & 158149
Genome Assembly:
GCA_026573395.1
Description:
Extension to Ser/Thr-type protein kinases
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3 | 3060860 | 3068331 | + | gene-BS78_03G034800 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.06 | 61,274.37 Da | 35.03 | 79.40 | -0.49 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd05599 | STKc_NDR_like | 107 | 480 | 0.0 | - |
| Pfam | PF00069 | Protein kinase domain | 110 | 260 | 6.7E-43 | IPR000719 |
| Pfam | PF00069 | Protein kinase domain | 308 | 416 | 5.4E-20 | IPR000719 |
| Pfam | PF00433 | Protein kinase C terminal domain | 435 | 479 | 2.8E-4 | IPR017892 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 92 | 469 | 1.75E-88 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 193 | 259 | 3.1E-68 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 71 | 192 | 3.1E-68 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 315 | 436 | 7.0E-43 | - |
| SMART | SM00220 | serkin_6 | 109 | 416 | 2.8E-103 | IPR000719 |
| SMART | SM00133 | pkinase_C_6 | 417 | 481 | 8.6E-7 | IPR000961 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 109 | 416 | 46.731964 | IPR000719 |
| ProSiteProfiles | PS51285 | AGC-kinase C-terminal domain profile. | 417 | 489 | 13.46838 | IPR000961 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 228 | 240 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 115 | 138 | - | IPR017441 |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G33080.1 | AGC (cAMP-dependent, cGMP-dependent and protein kinase C) kinase family protein. | 0 |
| RefSeq | XP_025815051.1 | serine/threonine-protein kinase tricorner-like [Panicum hallii] | 0 |
| Q15208 | Serine/threonine-protein kinase 38 OS=Homo sapiens OX=9606 GN=STK38 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2S3HYG8 | Serine/threonine-protein kinase tricorner OS=Panicum hallii OX=206008 GN=PAHAL_5G503400 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology