Basic Information
Locus ID:
gene-BS78_03G026700
Species & Taxonomic ID:
Paspalum vaginatum & 158149
Genome Assembly:
GCA_026573395.1
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3 | 2269341 | 2274773 | + | gene-BS78_03G026700 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.66 | 65,681.65 Da | 59.94 | 75.94 | -0.56 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd13999 | STKc_MAP3K-like | 283 | 532 | 1.00822E-108 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 279 | 532 | 2.3E-57 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 256 | 532 | 5.97E-77 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 360 | 576 | 4.3E-62 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 264 | 359 | 7.0E-12 | - |
| SMART | SM00220 | serkin_6 | 276 | 539 | 1.9E-60 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 276 | 539 | 42.68964 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 400 | 412 | - | IPR008271 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 440 | 450 | 3.2E-15 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 394 | 412 | 3.2E-15 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 459 | 481 | 3.2E-15 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 503 | 525 | 3.2E-15 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 356 | 369 | 3.2E-15 | IPR001245 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 139 | 167 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 139 | 230 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 89 | 125 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G58950.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_039846078.1 | serine/threonine/tyrosine-protein kinase HT1-like [Panicum virgatum] | 0 |
| Q2MHE4 | Serine/threonine/tyrosine-protein kinase HT1 OS=Arabidopsis thaliana OX=3702 GN=HT1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8T0SA29 | Protein kinase domain-containing protein OS=Panicum virgatum OX=38727 GN=PVAP13_5KG045400 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology