Basic Information
Locus ID:
gene-BS78_03G011700
Species & Taxonomic ID:
Paspalum vaginatum & 158149
Genome Assembly:
GCA_026573395.1
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3 | 1079718 | 1082343 | - | gene-BS78_03G011700 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.32 | 86,335.64 Da | 41.41 | 84.72 | 0.08 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 483 | 749 | 1.14296E-86 | - |
| CDD | cd01098 | PAN_AP_plant | 328 | 412 | 3.21867E-18 | - |
| Pfam | PF08276 | PAN-like domain | 336 | 394 | 1.2E-9 | IPR003609 |
| Pfam | PF00069 | Protein kinase domain | 480 | 681 | 3.4E-45 | IPR000719 |
| Pfam | PF01453 | D-mannose binding lectin | 106 | 181 | 1.4E-13 | IPR001480 |
| SUPERFAMILY | SSF51110 | alpha-D-mannose-specific plant lectins | 79 | 171 | 1.01E-13 | IPR036426 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 464 | 747 | 3.28E-73 | IPR011009 |
| Gene3D | G3DSA:2.90.10.10 | - | 34 | 166 | 9.7E-14 | IPR036426 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 452 | 551 | 1.8E-26 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 552 | 754 | 3.2E-54 | - |
| SMART | SM00108 | blect_4 | 39 | 169 | 3.2E-6 | IPR001480 |
| SMART | SM00220 | serkin_6 | 477 | 746 | 2.1E-28 | IPR000719 |
| PIRSF | PIRSF000641 | SRK | 12 | 776 | 9.3E-195 | IPR024171 |
| ProSiteProfiles | PS50948 | PAN/Apple domain profile. | 331 | 412 | 10.065052 | IPR003609 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 477 | 750 | 34.265778 | IPR000719 |
| ProSiteProfiles | PS50927 | Bulb-type lectin domain profile. | 39 | 165 | 13.757786 | IPR001480 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 596 | 608 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 483 | 506 | - | IPR017441 |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G19130.1 | S-locus lectin protein kinase family protein. | 0 |
| RefSeq | XP_034594107.1 | G-type lectin S-receptor-like serine/threonine-protein kinase At2g19130 [Setaria viridis] | 0 |
| O64477 | G-type lectin S-receptor-like serine/threonine-protein kinase At2g19130 OS=Arabidopsis thaliana OX=3702 GN=At2g19130 PE=2 SV=1 | 0 | |
| TrEMBL | A0A4U6U8L7 | Receptor-like serine/threonine-protein kinase OS=Setaria viridis OX=4556 GN=SEVIR_5G015500v2 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Eleusine coracana subsp. coracana | 1 | gene-QOZ80_1BG0049850 |
| Poaceae | Hordeum vulgare | 2 | HORVU.MOREX.r3.3HG0219000.1.CDS1 ... |
| Poaceae | Lolium multiflorum | 2 | gene-QYE76_051417, gene-QYE76_051419 |
| Poaceae | Oryza coarctata | 1 | Oco02G005430 |
| Poaceae | Oryza sativa | 1 | LOC_Os01g12290.1 |
| Poaceae | Paspalum vaginatum | 1 | gene-BS78_03G011700 |
| Poaceae | Thinopyrum elongatum | 3 | Tel5E01G867200, Tel6E01G181900, Tel7E01G057800 |
| Poaceae | Triticum dicoccoides | 8 | gene_TRIDC3AG002400, gene_TRIDC3AG068960 ... |
| Poaceae | Triticum aestivum | 9 | TraesCS3A02G003600.1.cds1, TraesCS3B02G174800.1 ... |
| Poaceae | Zea mays | 1 | Zm00001eb119590_P002 |