Basic Information
Locus ID:
gene-BS78_03G011100
Species & Taxonomic ID:
Paspalum vaginatum & 158149
Genome Assembly:
GCA_026573395.1
Description:
Serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3 | 1042236 | 1045278 | + | gene-BS78_03G011100 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.93 | 84,125.12 Da | 37.99 | 84.54 | -0.06 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 474 | 738 | 1.61416E-91 | - |
| CDD | cd01098 | PAN_AP_plant | 321 | 403 | 1.14188E-14 | - |
| CDD | cd00028 | B_lectin | 46 | 160 | 3.6542E-19 | IPR001480 |
| Pfam | PF00069 | Protein kinase domain | 471 | 734 | 8.7E-48 | IPR000719 |
| Pfam | PF08276 | PAN-like domain | 330 | 388 | 5.8E-8 | IPR003609 |
| Pfam | PF01453 | D-mannose binding lectin | 89 | 183 | 8.8E-17 | IPR001480 |
| SUPERFAMILY | SSF51110 | alpha-D-mannose-specific plant lectins | 108 | 178 | 2.09E-14 | IPR036426 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 452 | 737 | 1.62E-77 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 438 | 542 | 6.7E-29 | - |
| Gene3D | G3DSA:2.90.10.10 | - | 31 | 157 | 5.4E-12 | IPR036426 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 543 | 746 | 3.8E-59 | - |
| SMART | SM00108 | blect_4 | 43 | 160 | 1.5E-16 | IPR001480 |
| SMART | SM00220 | serkin_6 | 468 | 736 | 4.4E-36 | IPR000719 |
| PIRSF | PIRSF000641 | SRK | 14 | 766 | 3.2E-213 | IPR024171 |
| ProSiteProfiles | PS50948 | PAN/Apple domain profile. | 324 | 405 | 8.014143 | IPR003609 |
| ProSiteProfiles | PS50927 | Bulb-type lectin domain profile. | 37 | 156 | 10.66321 | IPR001480 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 468 | 737 | 36.753361 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 474 | 496 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 587 | 599 | - | IPR008271 |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G19130.1 | S-locus lectin protein kinase family protein. | 0 |
| RefSeq | XP_002454912.2 | G-type lectin S-receptor-like serine/threonine-protein kinase At2g19130 [Sorghum bicolor] | 0 |
| O64477 | G-type lectin S-receptor-like serine/threonine-protein kinase At2g19130 OS=Arabidopsis thaliana OX=3702 GN=At2g19130 PE=2 SV=1 | 0 | |
| TrEMBL | A0A811P3Q4 | Receptor-like serine/threonine-protein kinase OS=Miscanthus lutarioriparius OX=422564 GN=NCGR_LOCUS22852 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology