Basic Information
Locus ID:
gene-BS78_03G001900
Species & Taxonomic ID:
Paspalum vaginatum & 158149
Genome Assembly:
GCA_026573395.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3 | 301322 | 305291 | - | gene-BS78_03G001900 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.50 | 112,884.83 Da | 44.49 | 98.77 | -0.02 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 756 | 962 | 5.7E-45 | IPR000719 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 71 | 110 | 6.5E-10 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 164 | 223 | 2.6E-6 | IPR001611 |
| SUPERFAMILY | SSF52047 | RNI-like | 120 | 466 | 4.32E-60 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 408 | 646 | 3.91E-47 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 756 | 1037 | 1.34E-71 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 225 | 329 | 4.2E-23 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 72 | 224 | 7.3E-36 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 834 | 1047 | 2.1E-58 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 332 | 667 | 4.7E-89 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 714 | 833 | 1.1E-23 | - |
| SMART | SM00369 | LRR_typ_2 | 332 | 356 | 12.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 596 | 620 | 52.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 234 | 259 | 170.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 753 | 1016 | 7.4E-34 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 284 | 308 | 40.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 138 | 161 | 51.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 753 | 1034 | 37.700336 | IPR000719 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 140 | 162 | 7.411628 | IPR001611 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 877 | 889 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 759 | 782 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 47 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 18 | 47 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G28440.1 | HAESA-like 1. | 0 |
| RefSeq | XP_025817158.1 | receptor-like protein kinase HSL1 [Panicum hallii] | 0 |
| Q9SGP2 | Receptor-like protein kinase HSL1 OS=Arabidopsis thaliana OX=3702 GN=HSL1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2S3HZC1 | Protein kinase domain-containing protein OS=Panicum hallii OX=206008 GN=PAHAL_5G538800 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology