Basic Information
Locus ID:
gene-BS78_02G399300
Species & Taxonomic ID:
Paspalum vaginatum & 158149
Genome Assembly:
GCA_026573395.1
Description:
Protein FAR1-RELATED SEQUENCE
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2 | 51556592 | 51559664 | + | gene-BS78_02G399300 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.47 | 70,247.20 Da | 36.45 | 78.29 | -0.36 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF10551 | MULE transposase domain | 147 | 239 | 9.1E-25 | IPR018289 |
| Pfam | PF04434 | SWIM zinc finger | 434 | 463 | 1.2E-5 | IPR007527 |
| SMART | SM00575 | 26again6 | 439 | 466 | 0.01 | IPR006564 |
| ProSiteProfiles | PS50966 | Zinc finger SWIM-type profile. | 429 | 464 | 9.779547 | IPR007527 |
| Coils | Coil | Coil | 352 | 372 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G38180.1 | FAR1-related sequence 5. | 0 |
| RefSeq | XP_021310926.1 | protein FAR1-RELATED SEQUENCE 11 [Sorghum bicolor] | 0 |
| Q9SZL8 | Protein FAR1-RELATED SEQUENCE 5 OS=Arabidopsis thaliana OX=3702 GN=FRS5 PE=1 SV=1 | 0 | |
| TrEMBL | A0A1Z5R492 | Protein FAR1-RELATED SEQUENCE OS=Sorghum bicolor OX=4558 GN=SORBI_3009G172000 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology