Basic Information
Locus ID:
gene-BS78_02G383200
Species & Taxonomic ID:
Paspalum vaginatum & 158149
Genome Assembly:
GCA_026573395.1
Description:
Salt stress response/antifungal
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2 | 50132984 | 50136212 | - | gene-BS78_02G383200 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.84 | 73,485.42 Da | 39.52 | 94.16 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 369 | 638 | 7.50361E-92 | - |
| Pfam | PF01657 | Salt stress response/antifungal | 49 | 146 | 7.5E-10 | IPR002902 |
| Pfam | PF01657 | Salt stress response/antifungal | 174 | 263 | 1.0E-10 | IPR002902 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 364 | 636 | 4.2E-42 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 338 | 638 | 9.71E-76 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 328 | 439 | 5.6E-34 | - |
| Gene3D | G3DSA:3.30.430.20 | - | 160 | 265 | 1.9E-19 | IPR038408 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 440 | 646 | 2.3E-53 | - |
| Gene3D | G3DSA:3.30.430.20 | - | 41 | 150 | 6.7E-11 | IPR038408 |
| SMART | SM00220 | serkin_6 | 363 | 638 | 2.5E-29 | IPR000719 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 41 | 150 | 12.985687 | IPR002902 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 363 | 646 | 35.594372 | IPR000719 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 156 | 266 | 17.448374 | IPR002902 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 369 | 391 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 485 | 497 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G23280.2 | - | 0 |
| RefSeq | XP_039834746.1 | cysteine-rich receptor-like protein kinase 19 [Panicum virgatum] | 0 |
| O65479 | Putative cysteine-rich receptor-like protein kinase 20 OS=Arabidopsis thaliana OX=3702 GN=CRK20 PE=2 SV=2 | 0 | |
| TrEMBL | A0A8T0WJR8 | Receptor-like protein kinase OS=Panicum virgatum OX=38727 GN=PVAP13_2KG571900 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 4 | AH03.4000, BH03.4328, BH03.4330, CH07.183 |
| Poaceae | Eleusine coracana subsp. coracana | 2 | gene-QOZ80_7AG0580800, gene-QOZ80_7BG0611960 |
| Poaceae | Oryza coarctata | 1 | Oco13G015250 |
| Poaceae | Oryza sativa | 1 | LOC_Os07g47230.1 |
| Poaceae | Paspalum vaginatum | 1 | gene-BS78_02G383200 |
| Poaceae | Sporobolus alterniflorus | 2 | Chr19G000630, Chr27G016880 |
| Poaceae | Zoysia japonica | 1 | nbis-gene-150 |