Basic Information
Locus ID:
gene-BS78_02G380500
Species & Taxonomic ID:
Paspalum vaginatum & 158149
Genome Assembly:
GCA_026573395.1
Description:
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2 | 49984404 | 49985950 | + | gene-BS78_02G380500 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 10.58 | 41,190.82 Da | 60.04 | 82.28 | -0.30 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF81383 | F-box domain | 24 | 61 | 1.31E-5 | IPR036047 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 240 | 271 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 242 | 260 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 123 | 142 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 26 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_002463343.1 | uncharacterized protein LOC8073148 [Sorghum bicolor] | 0 |
| TrEMBL | C5X4T8 | F-box domain-containing protein OS=Sorghum bicolor OX=4558 GN=SORBI_3002G406900 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 13 | AH03.3980, BH03.4297, BH03.4300, BH03.4301, BH03.4302 ... |
| Poaceae | Eleusine coracana subsp. coracana | 8 | gene-QOZ80_3AG0241990, gene-QOZ80_5AG0385880 ... |
| Poaceae | Hordeum vulgare | 3 | HORVU.MOREX.r3.1HG0017790.1.CDS1 ... |
| Poaceae | Paspalum vaginatum | 3 | gene-BS78_02G380500, gene-BS78_04G264700 ... |
| Poaceae | Sporobolus alterniflorus | 2 | Chr24G014800, Chr28G012140 |
| Poaceae | Thinopyrum elongatum | 2 | Tel6E01G041900, Tel6E01G099200 |
| Poaceae | Triticum aestivum | 6 | TraesCS6A02G008900.1.cds1, TraesCS6A02G011200.1.cds1 ... |
| Poaceae | Zoysia japonica | 1 | nbis-gene-33189 |
| Poaceae | Zoysia macrostachya | 1 | Zma_g5731 |