Basic Information
Locus ID:
gene-BS78_02G370000
Species & Taxonomic ID:
Paspalum vaginatum & 158149
Genome Assembly:
GCA_026573395.1
Description:
RhoGAP domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2 | 49103328 | 49111897 | - | gene-BS78_02G370000 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.25 | 94,006.64 Da | 52.92 | 79.37 | -0.57 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00159 | RhoGAP | 189 | 328 | 4.30116E-32 | - |
| CDD | cd00821 | PH | 29 | 124 | 6.93751E-12 | - |
| Pfam | PF00169 | PH domain | 28 | 132 | 2.0E-12 | IPR001849 |
| Pfam | PF14389 | Leucine-zipper of ternary complex factor MIP1 | 606 | 686 | 3.6E-22 | IPR025757 |
| Pfam | PF00620 | RhoGAP domain | 189 | 333 | 1.0E-29 | IPR000198 |
| SUPERFAMILY | SSF48350 | GTPase activation domain, GAP | 189 | 382 | 5.89E-32 | IPR008936 |
| SUPERFAMILY | SSF50729 | PH domain-like | 22 | 139 | 6.85E-18 | - |
| Gene3D | G3DSA:1.10.555.10 | Rho GTPase activation protein | 159 | 382 | 1.3E-40 | IPR008936 |
| Gene3D | G3DSA:2.30.29.30 | - | 16 | 134 | 8.0E-18 | IPR011993 |
| SMART | SM00324 | RhoGAP_3 | 186 | 377 | 2.3E-24 | IPR000198 |
| SMART | SM00233 | PH_update | 27 | 135 | 6.7E-16 | IPR001849 |
| ProSiteProfiles | PS50238 | Rho GTPase-activating proteins domain profile. | 180 | 380 | 29.58033 | IPR000198 |
| ProSiteProfiles | PS50003 | PH domain profile. | 26 | 133 | 15.5715 | IPR001849 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 524 | 564 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 537 | 558 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 389 | 411 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 728 | 787 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 769 | 787 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 737 | 758 | - | - |
| Coils | Coil | Coil | 810 | 830 | - | - |
| Coils | Coil | Coil | 596 | 630 | - | - |
| Coils | Coil | Coil | 655 | 689 | - | - |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G19390.1 | Rho GTPase activation protein (RhoGAP) with PH domain. Encodes a protein with similarity to REN1, a Rho GTPase activating protein. | 0 |
| RefSeq | XP_004958565.1 | rho GTPase-activating protein 7 isoform X3 [Setaria italica] | 0 |
| Q8RWQ4 | Rho GTPase-activating protein 7 OS=Arabidopsis thaliana OX=3702 GN=ROPGAP7 PE=2 SV=1 | 0 | |
| TrEMBL | K3ZQL6 | Rho GTPase-activating protein 7-like OS=Setaria italica OX=4555 GN=101765349 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology