Basic Information
Locus ID:
gene-BS78_02G341600
Species & Taxonomic ID:
Paspalum vaginatum & 158149
Genome Assembly:
GCA_026573395.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2 | 47096509 | 47100259 | + | gene-BS78_02G341600 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.99 | 115,175.81 Da | 38.83 | 103.51 | 0.13 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 807 | 1075 | 3.19886E-91 | - |
| Pfam | PF00560 | Leucine Rich Repeat | 212 | 234 | 0.47 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 46 | 83 | 6.7E-11 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 588 | 647 | 2.7E-10 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 804 | 1000 | 3.9E-42 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 780 | 1072 | 6.07E-74 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 46 | 292 | 2.18E-49 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 210 | 692 | 5.44E-54 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 305 | 428 | 1.4E-21 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 104 | 304 | 2.8E-53 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 877 | 1081 | 3.8E-55 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 441 | 701 | 1.3E-49 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 763 | 876 | 9.7E-28 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 42 | 103 | 1.9E-8 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 634 | 657 | 40.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 610 | 633 | 0.41 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 258 | 282 | 48.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 801 | 1079 | 4.5E-33 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 586 | 609 | 210.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 184 | 208 | 16.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 210 | 234 | 270.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 137 | 160 | 16.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 801 | 1083 | 39.339882 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 807 | 829 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 921 | 933 | - | IPR008271 |
| PRINTS | PR00019 | Leucine-rich repeat signature | 565 | 578 | 6.6E-5 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 610 | 623 | 6.6E-5 | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G02130.2 | - | 0 |
| RefSeq | XP_025802274.1 | LRR receptor-like serine/threonine-protein kinase RPK2 [Panicum hallii] | 0 |
| Q9S7I6 | LRR receptor-like serine/threonine-protein kinase RPK2 OS=Arabidopsis thaliana OX=3702 GN=RPK2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A811NF74 | Protein kinase domain-containing protein OS=Miscanthus lutarioriparius OX=422564 GN=NCGR_LOCUS15606 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology