Basic Information
Locus ID:
gene-BS78_02G326000
Species & Taxonomic ID:
Paspalum vaginatum & 158149
Genome Assembly:
GCA_026573395.1
Description:
Belongs to the glycosyl hydrolase 17 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2 | 45910277 | 45914625 | + | gene-BS78_02G326000 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.71 | 52,201.35 Da | 39.62 | 86.10 | 0.10 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07983 | X8 domain | 363 | 434 | 5.8E-17 | IPR012946 |
| Pfam | PF00332 | Glycosyl hydrolases family 17 | 25 | 346 | 1.5E-72 | IPR000490 |
| SUPERFAMILY | SSF51445 | (Trans)glycosidases | 25 | 346 | 6.92E-76 | IPR017853 |
| Gene3D | G3DSA:1.20.58.1040 | - | 360 | 453 | 2.2E-9 | - |
| Gene3D | G3DSA:3.20.20.80 | Glycosidases | 24 | 352 | 3.8E-110 | - |
| SMART | SM00768 | X8_cls | 362 | 447 | 7.2E-41 | IPR012946 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G13560.1 | O-Glycosyl hydrolases family 17 protein. | 0 |
| RefSeq | XP_021308936.1 | glucan endo-1,3-beta-glucosidase 4 [Sorghum bicolor] | 0 |
| Q94CD8 | Glucan endo-1,3-beta-glucosidase 4 OS=Arabidopsis thaliana OX=3702 GN=At3g13560 PE=2 SV=1 | 0 | |
| TrEMBL | A0A1C8C9F4 | Beta-1,3-glucanase D2 OS=Saccharum hybrid cultivar Yacheng05-179 OX=1472232 GN=Glu PE=2 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology