Basic Information
Locus ID:
gene-BS78_02G317100
Species & Taxonomic ID:
Paspalum vaginatum & 158149
Genome Assembly:
GCA_026573395.1
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2 | 45275593 | 45281704 | - | gene-BS78_02G317100 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.36 | 84,531.36 Da | 41.18 | 92.94 | -0.16 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13855 | Leucine rich repeat | 148 | 206 | 2.3E-7 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 36 | 73 | 3.9E-4 | IPR013210 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 507 | 769 | 2.3E-30 | IPR001245 |
| SUPERFAMILY | SSF52058 | L domain-like | 33 | 241 | 2.68E-36 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 474 | 769 | 1.83E-54 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 37 | 261 | 6.2E-41 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 459 | 574 | 1.6E-22 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 577 | 781 | 3.8E-49 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 498 | 773 | 27.467321 | IPR000719 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 275 | 296 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 260 | 274 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 256 | 296 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G20850.1 | STRUBBELIG-receptor family 1. | 0 |
| RefSeq | XP_021308330.1 | protein STRUBBELIG-RECEPTOR FAMILY 3-like isoform X2 [Sorghum bicolor] | 0 |
| Q06BH3 | Protein STRUBBELIG-RECEPTOR FAMILY 1 OS=Arabidopsis thaliana OX=3702 GN=SRF1 PE=1 SV=2 | 0 | |
| TrEMBL | A0A1B6QF13 | Protein kinase domain-containing protein OS=Sorghum bicolor OX=4558 GN=SORBI_3002G341200 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology