halophFGD

Basic Information

Locus ID: gene-BS78_02G309000

Species & Taxonomic ID: Paspalum vaginatum & 158149

Genome Assembly: GCA_026573395.1

Description: F-box FBD LRR-repeat protein At4g03220

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
chr2	44690094	44691098	+	gene-BS78_02G309000

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
10.93	36,473.09 Da	38.49	85.45	-0.26

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
SUPERFAMILY	SSF81383	F-box domain	5	61	3.01E-9	IPR036047

Gene Ontology

Molecular Function:

GO:0005515 (protein binding)

Best hit

Source	Best Hit ID	Description	E-value
RefSeq	XP_025801722.1	F-box/LRR-repeat protein 25-like [Panicum hallii]	0
TrEMBL	K4A366	F-box domain-containing protein OS=Setaria italica OX=4555 PE=4 SV=1	0

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

🔍 Protein-Protein Interaction Network

Orthology

Family	Species	Count	Orthologous Genes
Amaranthaceae	Suaeda glauca	1	Sgl52245
Dunaliellaceae	Dunaliella salina	1	Dusal.0175s00007.v1.0
Poaceae	Echinochloa crus-galli	38	AH01.2194, AH03.3309, AH03.3310, AH03.92, AH03.93, AH03.95 ... AH03.97, AH04.1753, AH04.1754, AH07.1987, AH07.412, BH03.149, BH03.3474, BH03.3493, BH04.1755, BH04.1757, BH05.3281, BH05.3394, BH05.3991, BH07.529, BH07.537, CH02.3867, CH03.150, CH03.151, CH03.211, CH03.3694, CH03.3695, CH03.3705, CH03.3706, CH03.53, CH05.3376, CH05.3385, CH05.3387, CH05.3388, Contig1297.2, Contig1297.4, Contig1297.5, Contig1297.7
Poaceae	Eleusine coracana subsp. coracana	33	gene-QOZ80_2AG0111000, gene-QOZ80_2AG0111010 ... gene-QOZ80_2BG0164450, gene-QOZ80_4BG0348370, gene-QOZ80_5AG0367070, gene-QOZ80_5AG0387690, gene-QOZ80_5BG0415190, gene-QOZ80_5BG0454240, gene-QOZ80_5BG0454250, gene-QOZ80_7AG0553160, gene-QOZ80_7AG0553170, gene-QOZ80_7AG0553180, gene-QOZ80_7AG0553190, gene-QOZ80_7AG0553200, gene-QOZ80_7AG0553230, gene-QOZ80_7AG0553240, gene-QOZ80_7AG0553250, gene-QOZ80_7AG0555680, gene-QOZ80_7AG0559090, gene-QOZ80_7AG0571290, gene-QOZ80_7AG0571560, gene-QOZ80_7BG0584270, gene-QOZ80_7BG0584290, gene-QOZ80_7BG0586650, gene-QOZ80_7BG0590350, gene-QOZ80_7BG0602720, gene-QOZ80_7BG0603220, gene-QOZ80_7BG0603240, gene-QOZ80_7BG0603300, gene-QOZ80_7BG0603320, gene-QOZ80_9AG0684190, gene-QOZ80_9BG0710270, gene-QOZ80_UnG0726170
Poaceae	Hordeum vulgare	7	HORVU.MOREX.r3.1HG0018810.1, HORVU.MOREX.r3.2HG0155620.1 ... HORVU.MOREX.r3.2HG0155680.1, HORVU.MOREX.r3.2HG0156270.1, HORVU.MOREX.r3.2HG0193230.1, HORVU.MOREX.r3.3HG0239610.1.CDS1, HORVU.MOREX.r3.4HG0395620.1.CDS1
Poaceae	Lolium multiflorum	43	gene-QYE76_009425, gene-QYE76_009426, gene-QYE76_009517 ... gene-QYE76_009518, gene-QYE76_009534, gene-QYE76_009536, gene-QYE76_009541, gene-QYE76_009544, gene-QYE76_009829, gene-QYE76_009853, gene-QYE76_010033, gene-QYE76_010968, gene-QYE76_010969, gene-QYE76_010972, gene-QYE76_013861, gene-QYE76_016365, gene-QYE76_016544, gene-QYE76_027139, gene-QYE76_030511, gene-QYE76_030519, gene-QYE76_039830, gene-QYE76_040676, gene-QYE76_043209, gene-QYE76_046139, gene-QYE76_049207, gene-QYE76_049873, gene-QYE76_050043, gene-QYE76_050284, gene-QYE76_050292, gene-QYE76_050294, gene-QYE76_050835, gene-QYE76_056879, gene-QYE76_057719, gene-QYE76_059966, gene-QYE76_064716, gene-QYE76_068849, gene-QYE76_068850, gene-QYE76_068852, gene-QYE76_068879, gene-QYE76_069011, gene-QYE76_071942, gene-QYE76_071955, gene-QYE76_071956
Poaceae	Oryza coarctata	17	Oco01G011170, Oco02G010020, Oco05G025270, Oco12G006760 ... Oco13G001270, Oco13G009520, Oco14G000530, Oco14G001340, Oco14G001350, Oco14G001390, Oco14G004550, Oco14G004690, Oco14G005510, Oco14G010090, Oco14G010100, Oco14G010120, Oco14G010190
Poaceae	Oryza sativa	17	LOC_Os07g02290.1, LOC_Os07g02760.1, LOC_Os07g02770.1 ... LOC_Os07g04980.1, LOC_Os07g12540.1, LOC_Os07g12560.1, LOC_Os07g12590.2, LOC_Os07g12600.1, LOC_Os07g12610.1, LOC_Os07g36320.1, LOC_Os07g36330.1, LOC_Os07g36340.1, LOC_Os07g36360.1, LOC_Os07g36370.1, LOC_Os07g36400.1, LOC_Os07g36520.1, LOC_Os07g36530.1
Poaceae	Paspalum vaginatum	19	gene-BS78_01G085500, gene-BS78_01G128700 ... gene-BS78_02G012100, gene-BS78_02G012600, gene-BS78_02G013000, gene-BS78_02G013100, gene-BS78_02G063900, gene-BS78_02G309000, gene-BS78_03G168100, gene-BS78_04G025300, gene-BS78_04G025600, gene-BS78_05G063000, gene-BS78_05G177100, gene-BS78_05G177300, gene-BS78_05G177400, gene-BS78_06G155700, gene-BS78_09G039500, gene-BS78_10G233600, gene-BS78_10G233800
Poaceae	Puccinellia tenuiflora	31	Pt_Chr0200116, Pt_Chr0200117, Pt_Chr0200122, Pt_Chr0202128 ... Pt_Chr0202173, Pt_Chr0300431, Pt_Chr0303353, Pt_Chr0303382, Pt_Chr0306501, Pt_Chr0307488, Pt_Chr0500492, Pt_Chr0500495, Pt_Chr0500496, Pt_Chr0500498, Pt_Chr0500499, Pt_Chr0500505, Pt_Chr0500509, Pt_Chr0500554, Pt_Chr0500556, Pt_Chr0501507, Pt_Chr0501622, Pt_Chr0501685, Pt_Chr0501735, Pt_Chr0600005, Pt_Chr0600006, Pt_Chr0600018, Pt_Chr0600019, Pt_Chr0600020, Pt_Chr0605107, Pt_Chr0605108, Pt_Chr0605118
Poaceae	Sporobolus alterniflorus	8	Chr07G015770, Chr17G004770, Chr19G018670, Chr24G002210 ... Chr27G001110, Chr27G012420, Chr28G000460, Chr28G008980
Poaceae	Thinopyrum elongatum	12	Tel1E01G164700, Tel1E01G194100, Tel1E01G194300 ... Tel2E01G172600, Tel2E01G474100, Tel2E01G474300, Tel2E01G475800, Tel3E01G151500, Tel3E01G206300, Tel4E01G552700, Tel6E01G181700, Tel7E01G875400
Poaceae	Triticum dicoccoides	16	gene_TRIDC1BG014730, gene_TRIDC2AG037320 ... gene_TRIDC2AG037600, gene_TRIDC2AG037630, gene_TRIDC2AG047080, gene_TRIDC2BG040300, gene_TRIDC2BG040320, gene_TRIDC2BG040520, gene_TRIDC6AG009650, gene_TRIDC7AG066130, gene_TRIDC7AG071420, gene_TRIDC7BG008080, gene_TRIDC7BG059650, gene_TRIDC7BG066540, gene_TRIDC7BG066590, gene_TRIDC7BG066710
Poaceae	Triticum aestivum	35	TraesCS1A02G083900.1.cds1, TraesCS1A02G110700.1 ... TraesCS1A02G436900.1.cds1, TraesCS1A02G437000.1, TraesCS1B02G101200.1, TraesCS2A02G079100.1, TraesCS2A02G263100.1, TraesCS2A02G264200.3, TraesCS2A02G264400.1, TraesCS2A02G342400.1, TraesCS2A02G435800.1, TraesCS2B02G093900.1, TraesCS2B02G277700.1, TraesCS2B02G277900.1, TraesCS2B02G339900.1, TraesCS2B02G457400.1, TraesCS2D02G259500.1, TraesCS2D02G259700.2, TraesCS2D02G260900.1, TraesCS2D02G434100.1, TraesCS3A02G119900.1.cds1, TraesCS3B02G100300.1, TraesCS3B02G139300.1, TraesCS3D02G085200.1, TraesCS3D02G122000.1, TraesCS6A02G078500.1, TraesCS6A02G085500.1, TraesCS6B02G268400.1, TraesCS7A02G473800.1, TraesCS7A02G509700.1, TraesCS7B02G375100.1, TraesCS7B02G419600.1, TraesCS7B02G420000.1, TraesCS7D02G348800.1.cds1, TraesCS7D02G499100.1
Poaceae	Zea mays	3	Zm00001eb116530_P002, Zm00001eb162720_P001 ... Zm00001eb168800_P001
Poaceae	Zoysia japonica	6	nbis-gene-35863, nbis-gene-35864, nbis-gene-35865 ... nbis-gene-50425, nbis-gene-56969, nbis-gene-57498
Poaceae	Zoysia macrostachya	2	Zma_g4686, Zma_g6614
Rhizophoraceae	Carallia pectinifolia	1	nbisL1-mrna-19424