Basic Information
Locus ID:
gene-BS78_02G304000
Species & Taxonomic ID:
Paspalum vaginatum & 158149
Genome Assembly:
GCA_026573395.1
Description:
Cysteine-rich receptor-like protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2 | 44304632 | 44309144 | - | gene-BS78_02G304000 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.37 | 74,654.05 Da | 42.78 | 92.24 | 0.02 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 365 | 630 | 9.95255E-89 | - |
| Pfam | PF00069 | Protein kinase domain | 359 | 568 | 1.3E-49 | IPR000719 |
| Pfam | PF01657 | Salt stress response/antifungal | 43 | 137 | 5.3E-18 | IPR002902 |
| Pfam | PF01657 | Salt stress response/antifungal | 165 | 260 | 3.4E-10 | IPR002902 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 340 | 628 | 1.2E-81 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 435 | 638 | 4.7E-59 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 322 | 434 | 1.3E-33 | - |
| Gene3D | G3DSA:3.30.430.20 | - | 37 | 141 | 6.2E-23 | IPR038408 |
| Gene3D | G3DSA:3.30.430.20 | - | 158 | 263 | 9.3E-13 | IPR038408 |
| SMART | SM00220 | serkin_6 | 359 | 626 | 5.0E-36 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 359 | 643 | 39.636696 | IPR000719 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 37 | 141 | 19.340263 | IPR002902 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 155 | 264 | 14.080992 | IPR002902 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 365 | 387 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 480 | 492 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G23160.1 | cysteine-rich RLK (RECEPTOR-like protein kinase) 8. Encodes a cysteine-rich receptor-like protein kinase. | 0 |
| RefSeq | XP_021307784.1 | cysteine-rich receptor-like protein kinase 10 [Sorghum bicolor] | 0 |
| Q0D5R3 | Cysteine-rich receptor-like protein kinase 6 OS=Oryza sativa subsp. japonica OX=39947 GN=CRK6 PE=1 SV=1 | 0 | |
| TrEMBL | A0A1W0W6T0 | Cysteine-rich receptor-like protein kinase 10 OS=Sorghum bicolor OX=4558 GN=SORBI_3002G328000 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology