Basic Information
Locus ID:
gene-BS78_02G303600
Species & Taxonomic ID:
Paspalum vaginatum & 158149
Genome Assembly:
GCA_026573395.1
Description:
Cysteine-rich receptor-like protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2 | 44230114 | 44246950 | - | gene-BS78_02G303600 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.99 | 74,819.25 Da | 39.87 | 91.25 | -0.10 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF01657 | Salt stress response/antifungal | 32 | 127 | 4.5E-16 | IPR002902 |
| Pfam | PF00069 | Protein kinase domain | 352 | 561 | 1.7E-49 | IPR000719 |
| Pfam | PF01657 | Salt stress response/antifungal | 151 | 246 | 3.8E-11 | IPR002902 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 335 | 621 | 3.51E-78 | IPR011009 |
| Gene3D | G3DSA:3.30.430.20 | - | 140 | 250 | 2.3E-20 | IPR038408 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 316 | 427 | 8.7E-31 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 428 | 639 | 2.7E-58 | - |
| Gene3D | G3DSA:3.30.430.20 | - | 28 | 129 | 2.2E-19 | IPR038408 |
| SMART | SM00220 | serkin_6 | 352 | 594 | 2.0E-38 | IPR000719 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 26 | 130 | 17.547947 | IPR002902 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 140 | 250 | 17.765198 | IPR002902 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 352 | 639 | 39.311615 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 358 | 380 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 473 | 485 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 263 | 282 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G23160.1 | cysteine-rich RLK (RECEPTOR-like protein kinase) 8. Encodes a cysteine-rich receptor-like protein kinase. | 0 |
| RefSeq | XP_021307784.1 | cysteine-rich receptor-like protein kinase 10 [Sorghum bicolor] | 0 |
| Q0D5R3 | Cysteine-rich receptor-like protein kinase 6 OS=Oryza sativa subsp. japonica OX=39947 GN=CRK6 PE=1 SV=1 | 0 | |
| TrEMBL | A0A1W0W6T0 | Cysteine-rich receptor-like protein kinase 10 OS=Sorghum bicolor OX=4558 GN=SORBI_3002G328000 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology