Basic Information
Locus ID:
gene-BS78_02G302300
Species & Taxonomic ID:
Paspalum vaginatum & 158149
Genome Assembly:
GCA_026573395.1
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2 | 44133751 | 44137210 | - | gene-BS78_02G302300 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 11.34 | 60,589.17 Da | 58.30 | 82.45 | -0.78 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 298 | 460 | 1.5E-27 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 296 | 528 | 3.14E-48 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 364 | 461 | 6.8E-25 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 285 | 361 | 6.0E-26 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 462 | 535 | 9.1E-8 | - |
| SMART | SM00220 | serkin_6 | 299 | 537 | 1.9E-7 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 286 | 539 | 23.4674 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 416 | 428 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 73 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 24 | 43 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 91 | 166 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 91 | 113 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 134 | 162 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G05200.1 | cysteine-rich RLK (RECEPTOR-like protein kinase) 25. Encodes a cysteine-rich receptor-like protein kinase. | 0 |
| RefSeq | XP_025800487.1 | cysteine-rich receptor-like protein kinase 6 [Panicum hallii] | 0 |
| Q0D5R3 | Cysteine-rich receptor-like protein kinase 6 OS=Oryza sativa subsp. japonica OX=39947 GN=CRK6 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3L6TBD9 | Protein kinase domain-containing protein OS=Panicum miliaceum OX=4540 GN=C2845_PM03G09200 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
No orthogroup found for gene-BS78_02G302300.