Basic Information
Locus ID:
gene-BS78_02G290200
Species & Taxonomic ID:
Paspalum vaginatum & 158149
Genome Assembly:
GCA_026573395.1
Description:
PAN-like domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2 | 43300191 | 43302966 | - | gene-BS78_02G290200 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.04 | 85,808.42 Da | 41.26 | 86.80 | 0.02 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 491 | 756 | 8.59024E-93 | - |
| CDD | cd01098 | PAN_AP_plant | 331 | 416 | 5.81301E-16 | - |
| Pfam | PF01453 | D-mannose binding lectin | 103 | 193 | 3.7E-17 | IPR001480 |
| Pfam | PF00954 | S-locus glycoprotein domain | 240 | 312 | 8.7E-6 | IPR000858 |
| Pfam | PF08276 | PAN-like domain | 344 | 401 | 1.4E-9 | IPR003609 |
| Pfam | PF00069 | Protein kinase domain | 488 | 752 | 1.6E-50 | IPR000719 |
| SUPERFAMILY | SSF51110 | alpha-D-mannose-specific plant lectins | 103 | 197 | 8.38E-14 | IPR036426 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 470 | 755 | 9.17E-81 | IPR011009 |
| Gene3D | G3DSA:2.90.10.10 | - | 34 | 168 | 4.2E-13 | IPR036426 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 561 | 763 | 1.7E-62 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 462 | 560 | 2.2E-27 | - |
| SMART | SM00108 | blect_4 | 45 | 170 | 1.1E-7 | IPR001480 |
| SMART | SM00220 | serkin_6 | 485 | 758 | 1.7E-42 | IPR000719 |
| PIRSF | PIRSF000641 | SRK | 11 | 785 | 3.0E-213 | IPR024171 |
| ProSiteProfiles | PS50948 | PAN/Apple domain profile. | 334 | 417 | 8.10507 | IPR003609 |
| ProSiteProfiles | PS50927 | Bulb-type lectin domain profile. | 39 | 166 | 11.443248 | IPR001480 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 485 | 758 | 38.94413 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 605 | 617 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 491 | 514 | - | IPR017441 |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G19130.1 | S-locus lectin protein kinase family protein. | 0 |
| RefSeq | XP_025802846.1 | G-type lectin S-receptor-like serine/threonine-protein kinase At2g19130 [Panicum hallii] | 0 |
| O64477 | G-type lectin S-receptor-like serine/threonine-protein kinase At2g19130 OS=Arabidopsis thaliana OX=3702 GN=At2g19130 PE=2 SV=1 | 0 | |
| TrEMBL | A0A1E5WFT2 | Receptor-like serine/threonine-protein kinase OS=Dichanthelium oligosanthes OX=888268 GN=BAE44_0002728 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology