Basic Information
Locus ID:
gene-BS78_02G238200
Species & Taxonomic ID:
Paspalum vaginatum & 158149
Genome Assembly:
GCA_026573395.1
Description:
Protein of unknown function (DUF295)
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2 | 39457364 | 39458563 | - | gene-BS78_02G238200 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.40 | 36,510.30 Da | 45.31 | 92.51 | -0.04 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF03478 | Protein of unknown function (DUF295) | 206 | 258 | 8.2E-13 | IPR005174 |
| Gene3D | G3DSA:1.20.1280.50 | - | 3 | 47 | 2.5E-5 | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G65770.1 | ascorbic acid mannose pathway regulator 1. Encodes AMR1 (Ascorbic acid Mannose Pathway Regulator 1). Coordinately and negatively regulates the mannose/L-galactose ascorbic acid biosynthetic pathway in response to developmental and environmental cues. | 0 |
| RefSeq | XP_039795881.1 | uncharacterized protein LOC120661206 [Panicum virgatum] | 0 |
| Q9SHX9 | Putative F-box protein At1g65770 OS=Arabidopsis thaliana OX=3702 GN=At1g65770 PE=4 SV=1 | 0 | |
| TrEMBL | A0A3L6TEE3 | DUF295 domain-containing protein OS=Panicum miliaceum OX=4540 GN=C2845_PM03G02860 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology